Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3338 ATGTGTTGTAGACCTCATTGCTTCTGGTGCCTCTATTGCACAATCTACGCCGTCATATTTTTCTTCATGACTTTCTCAATCATCTCCTGGATAATAATCTCGCCCTCAAGTGTGAAGTTCCACATAACCGATGCTACACTCACCGAGTTTAACCTCACAAACAACAACAATACCTTGTTCTACAATTTCAAAGTCAACGTCACAACACGAAATCCCAACAACAACATCATAGTCTATTACCGAAGAATTGCCGCGATTGCTTGGTACAAAGACAATTATTTTGGTTATGTGAGTTTGTCACCGTTCGATCAAGGACACAAGAATACAACTTTTCTTGGACCTATAGAGTTTAAAGGGAATACTACGATCAAACTTGGACGTCAACAACTTGACGAGTATTTTGAAGAGAGGCGTCTCGGGATTCACAATGATTTGGCTGTTGATTTTGATATTCGAATTAGAGCTAAGTTTGGAAGCTTTTATAAAAGTGGTCGGTTTAATACACCAGTTGTGCAGTGTCGTCGTTTGAGTGTTCCTTTGATTTCTTCTTCCAATGGTAACTCTTCATCATCAACATTTTCTTTTAGTGAGAGAAGATGTAGCAGTGGTTCTTTCTTTACAGATCGTGATGCAAATGCAGGAGCTTGA 648 0.392 MCCRPHCFWCLYCTIYAVIFFFMTFSIISWIIISPSSVKFHITDATLTEFNLTNNNNTLFYNFKVNVTTRNPNNNIIVYYRRIAAIAWYKDNYFGYVSLSPFDQGHKNTTFLGPIEFKGNTTIKLGRQQLDEYFEERRLGIHNDLAVDFDIRIRAKFGSFYKSGRFNTPVVQCRRLSVPLISSSNGNSSSSTFSFSERRCSSGSFFTDRDANAGA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3338 215 PANTHER HARPIN-INDUCED 1 17 206 - -
Mal6g3338 215 PANTHER OS05G0367900 PROTEIN 17 206 IPR044839 GO:0098542
Mal6g3338 215 Pfam Late embryogenesis abundant protein 67 166 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3338 Mal-Chr6 96717655 96718302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3338 32 185 SNARE and Associated Proteins AT1G32270 30.323 4.67e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3338 - - mtr:MTR_6g070890 336.65