Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3336 ATGGGTGGCAGTTCTAACTGGTGCAAGCGCATGTGTTGCACATTATGCGCAGCTATAGTCCTCTTGGCGATTATCATAGCCATCTTTTGGATAGCAATCTCCCCCTCAAGCGTGAAATTCCACGTAACCGACGCAACTCTCACCGAGTTCAACCTCACAAACAACAATTTACATTACAATTTCAAAGTGAATATCACTGCAAGAAATCCCAACAACAACATCATAGTCTATTATCGAAGAATCAATGCGATTGCTTGGTACAAAGACAATGATTTTAGTCGTGTGAGTTTAACACCCTTTGATCAAGGACACAAGAATACCACTTTTCTTGGACCTATAGAATTTAAAGGAAATACTACAATCAAACTTGGACGTCAACAACTTAAAGAGTATTCTGAAGAGACGCGTCTTGGGATTTATAAAGATTTGGCTATTGATTTTGATGTTCGAATTAGAGTTAAGTTTGGAAGCTTTTATAAAAGTGGTCGGTTTAATCCACCGGTTGTGCAGTGTCGTCGTTTGAGAGTTCCTTTGGTTTCATCTTCTAACTCATCATCATCAACATTTTCTTTCAGTGTTAGAAGATGTAGCAGTGGTTCTTTCTTTACAGATCGTGATTTAGATAAATTAGCTTGA 636 0.3821 MGGSSNWCKRMCCTLCAAIVLLAIIIAIFWIAISPSSVKFHVTDATLTEFNLTNNNLHYNFKVNITARNPNNNIIVYYRRINAIAWYKDNDFSRVSLTPFDQGHKNTTFLGPIEFKGNTTIKLGRQQLKEYSEETRLGIYKDLAIDFDVRIRVKFGSFYKSGRFNPPVVQCRRLRVPLVSSSNSSSSTFSFSVRRCSSGSFFTDRDLDKLA* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3336 211 Pfam Late embryogenesis abundant protein 64 164 IPR004864 -
Mal6g3336 211 PANTHER HARPIN-INDUCED 1 17 202 - -
Mal6g3336 211 PANTHER OS05G0367900 PROTEIN 17 202 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3336 Mal-Chr6 96652908 96653543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3336 33 185 SNARE and Associated Proteins AT1G32270 32.903 2.49e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3336 - - mtr:MTR_6g070890 286.574