Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3334 ATGTATCAAACACCTTCTTCATTGTTCCAAAACCAAACCCCATTTTCAATGCCATTCACCACCCACTCACCACCATCTTCTTCCCCTTTCACCATTGCCACTCCTTCAAACCTCACCTTCAAAACCACACCTCGTTTCCCTCTCTCTTCCACAAGAAACCGCTCACGTTTTGCAACAGTGGTTAGAGCTAAAGGTGGAAATGATCACTACTCTACTTTGAATGTTAGCAACAATGCTTCGTTGCAAGAAATTAAGATCTCTTACAGGAAACTTGCTCGAAAGTACCATCCAGATATGAACAAAAGCCCTGGAGCAGAAGACAAATTCAAGGAGATTAGTGCTGCATACGAGGTTCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGGGAGTCAGGTCTACAAGGAGAAAATGGAGGACCAGCCGGTGCATCAGGGGTTGATCCTTCTGATTTATTTGATGCATTCTTTGGTCGTTCGGATGGACTATTTAGTGATGAAGGGGGCTTCGGCTTCAATATGAGAAACGATAGAAATCGTGGCCATGATATTCGGTATGACCTTCGTTTGAGCTTTGAAGAATCTATTTTTGGAGGAAAGAGAGAGATCGAAGTTTCTTGTTATGAGACATGTAACAATTGTGATGGTACAGGAGCTAAATCAAAGAATTGCATTAAAAAATGCACAAATTGTGGTGGCAAAGGAGGAGAGAAGAAAACCCAGAAAACACCGTTTGGAATGATGTCTCAGGTTTCTACCTGCTCTAAGTGTGGTGGTCTCGGCATGATAATCACGGACAGCTGTCGAAAGTGTGATGGCAGTGGTCGTGTGCAAACAAAACGAAAAACGGAAGTGGTCATTCCTCCTGGCGTCAGTGATGGAGACACAATGAAAATTCGAGGAGAAGGGAATTTCGATAAGAGGAGGCGTTATACTGGCGATCTTTTTGTTGTCCTCCATGTCGATGGAAAGCTAGGAATTTGGAGAGAAGGTCTCAATTTATACTCAAAGATTAACATTGACTTCACAGAGGCAATACTAGGGTCTGTTAGAAAGGTAGAAACTGTTGAAGGTTTTAGGGACCTCGACATTCCTTCCGGGATTCAACATGGACATTCATTGAAGTTATCACGTTTGGGAGTTCCAAACATGAATAAACCATCTATTCGAGGCGACCATTACTTCGTTGTAAATGTTCTTATTCCTAAAGATATCAGTGGCACGGAACGCGCACTTGTTGAGCAGTTAGCTTCACTGCGAGCATCTAGACAAGGGAAGCCTAAAAGAAAATTCGATGATTCCATGTGGAGGGATCAAAAAAGTGATGCCTCAAGCGAGGGAACTGAAACTGCAAATTCTCTATGGGGATCAATCAAGAACTTCTTAAGGAGAGGAAACTCTGAAGAAAGATTTGCATCAATTAGCCAGGATACGTCAACACTGTTGTGGAGATTTGACCACCAAAACTATTTAGTCCCACATTCCATTTTTTTTGTTCTATTTATAACTTGGATTTTTAAATCTATAGCAAAGTCTAAGCACTTGTTATTTCAGAAAAGAACCTAA 1572 0.4141 MYQTPSSLFQNQTPFSMPFTTHSPPSSSPFTIATPSNLTFKTTPRFPLSSTRNRSRFATVVRAKGGNDHYSTLNVSNNASLQEIKISYRKLARKYHPDMNKSPGAEDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGPAGASGVDPSDLFDAFFGRSDGLFSDEGGFGFNMRNDRNRGHDIRYDLRLSFEESIFGGKREIEVSCYETCNNCDGTGAKSKNCIKKCTNCGGKGGEKKTQKTPFGMMSQVSTCSKCGGLGMIITDSCRKCDGSGRVQTKRKTEVVIPPGVSDGDTMKIRGEGNFDKRRRYTGDLFVVLHVDGKLGIWREGLNLYSKINIDFTEAILGSVRKVETVEGFRDLDIPSGIQHGHSLKLSRLGVPNMNKPSIRGDHYFVVNVLIPKDISGTERALVEQLASLRASRQGKPKRKFDDSMWRDQKSDASSEGTETANSLWGSIKNFLRRGNSEERFASISQDTSTLLWRFDHQNYLVPHSIFFVLFITWIFKSIAKSKHLLFQKRT* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3334 523 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 200 280 IPR036410 -
Mal6g3334 523 Gene3D DnaJ domain 66 168 IPR036869 -
Mal6g3334 523 SUPERFAMILY Chaperone J-domain 67 174 IPR036869 -
Mal6g3334 523 MobiDBLite consensus disorder prediction 426 452 - -
Mal6g3334 523 CDD DnaJ 68 121 IPR001623 -
Mal6g3334 523 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Mal6g3334 523 Gene3D - 183 319 - -
Mal6g3334 523 MobiDBLite consensus disorder prediction 427 446 - -
Mal6g3334 523 CDD DnaJ_zf 213 277 IPR001305 GO:0031072|GO:0051082
Mal6g3334 523 CDD DnaJ_C 185 407 - -
Mal6g3334 523 Pfam DnaJ central domain 213 277 IPR001305 GO:0031072|GO:0051082
Mal6g3334 523 Gene3D - 213 277 - -
Mal6g3334 523 PANTHER EXPRESSED PROTEIN 73 428 - -
Mal6g3334 523 Pfam DnaJ C terminal domain 186 404 IPR002939 -
Mal6g3334 523 PRINTS DnaJ domain signature 124 143 IPR001623 -
Mal6g3334 523 PRINTS DnaJ domain signature 70 88 IPR001623 -
Mal6g3334 523 PRINTS DnaJ domain signature 104 124 IPR001623 -
Mal6g3334 523 PRINTS DnaJ domain signature 88 103 IPR001623 -
Mal6g3334 523 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 414 IPR008971 GO:0006457|GO:0051082
Mal6g3334 523 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 323 IPR008971 GO:0006457|GO:0051082
Mal6g3334 523 Pfam DnaJ domain 68 129 IPR001623 -
Mal6g3334 523 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Mal6g3334 523 Hamap Chaperone protein DnaJ [dnaJ]. 65 463 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mal6g3334 523 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 73 428 - -
Mal6g3334 523 Gene3D - 329 435 - -
Mal6g3334 523 ProSiteProfiles Zinc finger CR-type profile. 200 282 IPR001305 GO:0031072|GO:0051082
Mal6g3334 523 SMART dnaj_3 67 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3334 Mal-Chr6 96594518 96601847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3334 69 129 C2H2 Transcription Factor Family AT1G74250 44.776 7.05e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3334 K03686 - gmx:100782135 726.472