Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3331 ATGCAAATGCAAATGCAAATGAAATATCACTTCTCATTCTTCTTCTTTTTTCTGACACTTTTTCTTCCGTCGGTAAAACCCGATCTTACTTCCGAACGCGCCGCCCTCTTAACTCTACGCGCCGCCGTAGGTGGCCGAACCCTACTCTGGAACACAACCTCCTCCACTCCCTGCAACTGGGCCGGCGTCCATTGCAACCAAAACCACACTCACGTTTCCGAGCTTCACCTCCCCGCCGTCGCACTCTCCGGCAACCTCCCTGCCGGCGTATTCTCCGGCCTCCCCAACCTCCACACTCTCAGCCTCCGTTTCAATGCTCTCTCCGGTCCTCTTCCCTCCGACCTTGCTTCCTGCACCTCCCTCAAAAACCTCTACCTTCAACAAAATCTTCTCTCCGGCGAACTTCCGGCGACTTTTTTCAACCTCACCGGACTCGTTCGTCTCAATTTAGCTTCAAATAATTTCTCCGGCGAAATTCCGGTAGGGTTTCGCAACCTAACCAAGTTGAAAACTTTGTATCTTCAAAACAACCGGTTCACCGGTTCGTTAAGCGAGTTGAAACTGAACCCGGTTCAACTCGCTCAGTTCAATGTTTCTAACAACATGCTAAACGGTTCAGTTCCTGAAAAGTTGCAAACTTTTGGTAAAGATTCGTTTTTGGGTAATTTGTTATGTGGGAAACCACTTAACCCTTGTCCTAAGGAAGGAGGTGCAAATAGTGGAAATGGGGGTGCAAATAGAAATTCTAGTGTAGTTGATGAAAATCATGGGTTTGTGAGGAATAAGAAGAAAGGAAAATTATCTGGTGGTGCTATAGCTGGGATTGTTATTGGGTCAGTTGTGATTCTTTTGCTTGTGGTTTTTGCTTCGATTGTATTATGTAGGAATAGGAATGGTGAAAAAACTAGTTCAGTTGATGAAGTTGCAAGAACTTTGAAGCATAATCAGCTTATTGATGAAGGGATTCATGGTGAGAATGTTGGTAATGGAAATGGGTATTCAACGGCCGCGGCTATGGCGGTTGCGCCGGCACCGGTGAATGGTGAGAGAGGTGGTGAAGGTGTTGTTATTGGTGGTGGTGAGAAAAAATTGGTTTTTTTTAGGAATTGGGGTAAGGTGTTTGATTTAGAGGATTTGTTAAGAGCTTCTGCTGAGGTATTAGGGAAAGGGACTTTTGGGACTTCTTATAAGGCAGTTTTGGAGGTTGGTCCTGTGATTGTGGCTGTGAAGAGGTTAAGGGATGTGACTATTTCTGAGAGGGAATTTAAGGAGAAGATTGAGAGGGTTGGAACAATGGTTCATGAAAATTTGGCTCCTCTTAGGGCTTATTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGCATATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGGGGGTAGGACACCGCTGACTTGGGAAATGAGATCAGGCATTGCACTTGGTGCTGCTCGTGGCATTGAATACCTACATTCACAAGGGCCTAACGTTTCTCATGGAAACATAAAATCATCTAATGTCCTACTAACCAAGTCCTATGAAGCAAGAGTATCTGATTTTGGTCTTGCACATCTTGTTGGTCCTTCATCCACACCCAACAGGGTTGCTGGCTACCGTGCTCCCGAGGTAACCGATCCACGGAAAGTTTCTCAAAAGGCAGATGTATACAGCTTTGGTGTATTGCTCTTGGAACTTTTGACTGGAAAGGCTCCAACACATGCCCTCTTGAACGACGAAGGAGTAGACCTTCCGAGATGGGTGCAATCGGTTGTTAAAGAAGAATGGACTTCTGAGGTCTTTGATCTTGAACTTCTTAGGTATCAAAATGTTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCCGTAGATTGCGCTGCTACATACCCCGATAACCGTCCTTCAATGTCGCAAGTGAGACAACACATAGAAGAGTTGCATAGGTCTAGCTTGAAAGAGGGTGCTCAAGACCAAATTCAACAACCTGATATGATCAATGACATAGATGATATCTCTTCTAGATGA 2040 0.448 MQMQMQMKYHFSFFFFFLTLFLPSVKPDLTSERAALLTLRAAVGGRTLLWNTTSSTPCNWAGVHCNQNHTHVSELHLPAVALSGNLPAGVFSGLPNLHTLSLRFNALSGPLPSDLASCTSLKNLYLQQNLLSGELPATFFNLTGLVRLNLASNNFSGEIPVGFRNLTKLKTLYLQNNRFTGSLSELKLNPVQLAQFNVSNNMLNGSVPEKLQTFGKDSFLGNLLCGKPLNPCPKEGGANSGNGGANRNSSVVDENHGFVRNKKKGKLSGGAIAGIVIGSVVILLLVVFASIVLCRNRNGEKTSSVDEVARTLKHNQLIDEGIHGENVGNGNGYSTAAAMAVAPAPVNGERGGEGVVIGGGEKKLVFFRNWGKVFDLEDLLRASAEVLGKGTFGTSYKAVLEVGPVIVAVKRLRDVTISEREFKEKIERVGTMVHENLAPLRAYYYSRDEKLLVHDYLHMGSLSALLHGNKGGGRTPLTWEMRSGIALGAARGIEYLHSQGPNVSHGNIKSSNVLLTKSYEARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNDEGVDLPRWVQSVVKEEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAATYPDNRPSMSQVRQHIEELHRSSLKEGAQDQIQQPDMINDIDDISSR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3331 679 Gene3D Ribonuclease Inhibitor 29 186 IPR032675 -
Mal6g3331 679 Gene3D Ribonuclease Inhibitor 187 236 IPR032675 -
Mal6g3331 679 ProSiteProfiles Protein kinase domain profile. 381 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3331 679 Pfam Leucine rich repeat 73 131 IPR001611 GO:0005515
Mal6g3331 679 Pfam Leucine rich repeat 136 179 IPR001611 GO:0005515
Mal6g3331 679 MobiDBLite consensus disorder prediction 658 679 - -
Mal6g3331 679 SUPERFAMILY Protein kinase-like (PK-like) 385 653 IPR011009 -
Mal6g3331 679 Gene3D Phosphorylase Kinase; domain 1 360 456 - -
Mal6g3331 679 Gene3D Transferase(Phosphotransferase) domain 1 457 675 - -
Mal6g3331 679 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Mal6g3331 679 Pfam Protein kinase domain 384 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3331 679 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 679 - -
Mal6g3331 679 PANTHER OS05G0588300 PROTEIN 6 679 - -
Mal6g3331 679 MobiDBLite consensus disorder prediction 655 679 - -
Mal6g3331 679 SUPERFAMILY L domain-like 50 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3331 Mal-Chr6 96562268 96564884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3331 28 668 Receptor kinase-like Gene Family AT1G48480 59.006 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal6g3331 Pkinase 3.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3331 - - gmx:100781597 887.871