Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3330 ATGGTCTTCAAAGGAAGATTCTTCTCTTCCAAAAAATCTGACGCTTCTAGTCCAGATGCTTCTTCCAATAGTCCTCGATCGATTTCTTCGAATTCTCCTTCTAGATCTGATAAGAAAAAACCTAAATCGAGCGTTGTTCAAACCCTAAACGCCGCCGGAACCTCTACCACCGGCGGCGGTGGTTCTGATAAACTCGCCTCCGGTTCTAATCGGAAGACGCAAATTAAGGAAGGAAGTAAGAAGAAGGATGTTGTTAAAGGAAAGGAGAGTGATATTTTTCGGTCTGGATCGAAGAAATTGGCTCCGGCGACGGCGGCGGTGAAGGAGTTACCGGAGTTACCGTTACCGTCGCCGTATGCATCTTCATCGTCTGCGGCGGCGTCTGTTTCACCGATTTTGGCGTCGTCGTTAGGGTTGAATAGGATAAAGACGAGATCGGGACCGTTACCGCAGGAGAGTTTTTTTGGATTTAGAGGTGATAAAGGAGGAGCTACGGCGGCGGTGTTAGGCGCTAGTAATCTTTCGAGGTCTGGAAAGAAGAAGGAGGTTGGGAATCAGAGTAGAGTAGGGTTTCGGGAAGGTTTTGGAGTTGATAATGGGAGCAATTCGGATAGTATATCGACGGGGAGTGGGGGGAGTGGTGTGATGTCGATGGATCAGAGTCCGGTTGTTTTACCCCGGTCGCGGTTGCAGAATGGCGAATCGTCTTCTGGAGCAGGAGAGCAGGCATCATCACAGACTCAGGCTGGAGGCTTAAGAAGTGAAGATGTTTGCACTCCAGAGAACACATATGACTTTGAAAATCCGAAAGAATCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCCGGAAAGAGGTTTCCTGGTGATATCAAGAGTTTTTCGCATGAGTTAAATTCTAAAGGTGTCCGGCCCTTTCCATTTTGGAAGCCTCGAAGGTTAAATAATAACCTTGAGGAGATCTTGGTTGTCATTAGGGCTAAATTTGATAAAGAAAAGGAAGAGGTGAACTCTGAGCTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATAATCATCCGGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGCGCTGTGCTATGACTACATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAATTGGATGATAGGCGTCAAGAGCTACCGCCAGGGACGTTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTTACACGGTGTACTAGGTTGTTGCAATTCCACAAGGAAAGTGCTTTGGCTGAGGATGAACACGTTTTCAATCTCCGTCAATCCAGAGTCTTGCATTCTACTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAACTTCTAGTGCTGTAAAGGCCTCAAAGGCTTCAATGAAAAAAGCTTATAGCCAAGAGCAGAGTACCTTGGTTTGGAAGAAAAGTATTATGAAACCAGAAATTCAGTTGCCTCCTGCTGACGATGACATTTTAAAAAACTTCGAGTCTCCTTCTGGCAGGAATCGAATGGCTTCATGGAAAAAATTCCCATCTCCATCGGAAAGAAGCCCAAATGAAACTGCTCAGTTGAAGGACCAAAGTTATGGGACAGTTGAACCTTCAAAGACACCAGATAAGAGATTAACTTCTGATGTAGATCTCTCTGCTGCCAAGCATTCTGAGCTTCTCGCTGTCAAAGATTCCCATGACCATGCTTCCAAGCACCAACCAAAACCTTCCTGGGGCTACTGGGGAGACCAGCAGATTTATAATGAGGATAGTTCAATAATTTGTCGAATATGTGAAGAGGATGTACCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAAAAGGGTCTGAGTGTCAATGAGCGTCTTGTAAGAATTTCTGAAACACTTGAAAAGATGAAGGAATCATCTACTCAGAACGATACCCAACAAATGGTCGGAAGTCCCGATGTTGCAAAAGTTTCAAATTCAAGTATGACTGAAGAATCTGATGTTCTTTCCCCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAAACTGATAATTCTGCTTTTATGGATGACCTAAAGGGATTGCCACTTATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCTGGGAGCATGACTCCTAGGTCTCCTATAATGACACCAAGGGCAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCCGAACATGATGATCTGCCCCAGATGAATGAACTTGCTGATATAGCGAAATGTGCAGCCAATGTTAGTCTGGATGATGATCGAACAGCGGCATATTTATTATCGTGTCTAGATGATTTGAGGGTTGTCGTAGAACGAAGGAAGTTTGATGCACTTACTGTGGAAACCTTTGGAACACGCATTGAGAAGCTGATTCGGGAGAAGTATTTGCAGCTTACTGAGTTGGTGGATGTTGAAAAGATAGATGTAGAGAGCCCTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATTCATTCTTCAAAGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGCGGGGCCTTTGGGAGGGTTTTCTTGGCTAAGAAGAGGACAACTGGTGATCTTTTTGCAATAAAGGTTCTTAAGAAGGCAGATATGATCCGGAAGAATGCTGTAGAAAGTATATTAGCGGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGGTTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAGTATCTGAATGGGGGAGACTTGTATTCATTACTAAGGAATTTAGGTTGTCTAGATGAGGAAGTGGCCCGTGTATATATTGCTGAAGTGGTGCTTGCATTAGAGTATTTGCATTCACTGCATGTGGTTCATCGTGACTTGAAGCCTGACAATTTATTGATTGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGGGAGGATGATTCTCATACATATACATCTGAGGATCAAAGGGAACGGAGGAAGAAGCGTTCCGCTGTTGGCACACCTGATTACTTAGCTCCAGAGATACTTTTAGGAACTGGACATGCGTATACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAACGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGGTCCTGACGAAATGAGTCTTGAAGCACATGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGAGCCAGAGGGGCTTCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAATTGGGACACGCTTGCCCGACAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACCAGTTACTTTACTAGTCGCTACTCATGGAATACTTCTGATGGTGGCCTTGTATATCCGCCAAGTGATTTTGAAGATTCTAGTGATGCCGATAGCTTAAGTGGTAGCAGCAGTTGCCTGAGCAATCGCCAAGATGAAGTGGAGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCTTCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3918 0.4377 MVFKGRFFSSKKSDASSPDASSNSPRSISSNSPSRSDKKKPKSSVVQTLNAAGTSTTGGGGSDKLASGSNRKTQIKEGSKKKDVVKGKESDIFRSGSKKLAPATAAVKELPELPLPSPYASSSSAAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGGATAAVLGASNLSRSGKKKEVGNQSRVGFREGFGVDNGSNSDSISTGSGGSGVMSMDQSPVVLPRSRLQNGESSSGAGEQASSQTQAGGLRSEDVCTPENTYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNADNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQELDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHVFNLRQSRVLHSTGKCIPPSVGRDSKTSSAVKASKASMKKAYSQEQSTLVWKKSIMKPEIQLPPADDDILKNFESPSGRNRMASWKKFPSPSERSPNETAQLKDQSYGTVEPSKTPDKRLTSDVDLSAAKHSELLAVKDSHDHASKHQPKPSWGYWGDQQIYNEDSSIICRICEEDVPTSHVEDHSRICAVADRCDQKGLSVNERLVRISETLEKMKESSTQNDTQQMVGSPDVAKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPETDNSAFMDDLKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPIMTPRASQIDLLLAGKGAYSEHDDLPQMNELADIAKCAANVSLDDDRTAAYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTELVDVEKIDVESPVMDDDVILEDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDDSHTYTSEDQRERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPEGPDEMSLEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGGLVYPPSDFEDSSDADSLSGSSSCLSNRQDEVEGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA* 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3330 1305 ProSiteProfiles AGC-kinase C-terminal domain profile. 1182 1288 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal6g3330 1305 Coils Coil 319 339 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 172 272 - -
Mal6g3330 1305 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 80 1303 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 531 553 - -
Mal6g3330 1305 SMART serkin_6 892 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3330 1305 MobiDBLite consensus disorder prediction 224 253 - -
Mal6g3330 1305 Pfam Protein kinase domain 892 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3330 1305 PANTHER SERINE/THREONINE-PROTEIN KINASE 80 1303 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 1225 1250 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 10 32 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 735 755 - -
Mal6g3330 1305 SUPERFAMILY Protein kinase-like (PK-like) 889 1224 IPR011009 -
Mal6g3330 1305 Gene3D Phosphorylase Kinase; domain 1 890 1210 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 1 101 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 1232 1248 - -
Mal6g3330 1305 Gene3D Transferase(Phosphotransferase) domain 1 976 1199 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 506 561 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 1053 1081 - -
Mal6g3330 1305 ProSiteProfiles Protein kinase domain profile. 892 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3330 1305 MobiDBLite consensus disorder prediction 198 217 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 43 73 - -
Mal6g3330 1305 CDD STKc_MAST_like 898 1186 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 1064 1081 - -
Mal6g3330 1305 MobiDBLite consensus disorder prediction 74 95 - -
Mal6g3330 1305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1011 1023 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3330 Mal-Chr6 96542463 96556098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3330 1 1299 AGC Kinase Gene Family AT3G17850 65.658 0.0 1624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mal6g3330 Pkinase 2.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3330 - - cam:101496611 2167.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3330 6 96542463 96556098 Mal6g3330 6 96542463 96556098 ECH