Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3323 ATGGAGAAAGAATTCCTTGGCTTCAGTTCCAAAATTAGTCCATGGATTACTATGAAAGAAGATGCTTCCAACAAAACAAAAGACCCAGTTAGGAGTTCAGGAATGCAGTGGTCATTCTCAAATAAGGGTTCAAACCTTCCTCAATTCTTGTCCTTTAAGAGCACACATGAAGATAGGTCAAGAAACACTATTATGGATCCAGTAGCTTCATCTGGATATATGACTATTTCAAATAAAGATGCTTTTGAGTCTAATCAGAAATCATTCTTGGGTGTGACACAGGAAAATTTGCCCATAGGAAAGCAAGTAGGAAACAAGCATGGAATTACAATTTATCCTATGCAAAGTTCTGATGCACAATCAGTTTGCAACCAAGAAGCAAGAATATTTTCAGTTTCAAACCAATCTAACAATCAAATTTGTTCTGTTCTTCAATCTAATCCTGCTACTATTGAAATGAACATGGTCAACTCAGTTATAAATTCACAACCTTTTAGTTCTAAATCCTCTGCCACACCTGTTTCTGTTCTTCCATCAAGAGGTTCCATTGTTGGCTCTACAGACTTAAGGAGTAGGAGTTGTTCCAAATCCAATGGTACTACACCTGCTCAGCTGACCATATTTTATGGTGGTACAGTATGTGTCTATGATGACATATCTCCTGAGAAGTTGGCTTACCTCAGGCGCGAAAAGCATCGTTGA 702 0.3789 MEKEFLGFSSKISPWITMKEDASNKTKDPVRSSGMQWSFSNKGSNLPQFLSFKSTHEDRSRNTIMDPVASSGYMTISNKDAFESNQKSFLGVTQENLPIGKQVGNKHGITIYPMQSSDAQSVCNQEARIFSVSNQSNNQICSVLQSNPATIEMNMVNSVINSQPFSSKSSATPVSVLPSRGSIVGSTDLRSRSCSKSNGTTPAQLTIFYGGTVCVYDDISPEKLAYLRREKHR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3323 233 ProSiteProfiles Tify domain profile. 198 233 IPR010399 -
Mal6g3323 233 SMART tify_2 198 229 IPR010399 -
Mal6g3323 233 Pfam tify domain 201 223 IPR010399 -
Mal6g3323 233 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 35 223 - -
Mal6g3323 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 223 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3323 Mal-Chr6 96297782 96306500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3323 35 223 Tify Gene Family AT3G17860 38.974 1.70e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal6g3323 tify 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3323 K13464 - gmx:100807288 279.641