Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3304 ATGGAAGAATCAACAGAAGCACCAAAATCATTGATGGAGAATCTATTAGGCCTTTTGAGGGTTCGTGTGAAACGTGGTGTTAACCTTGCTGTTCGTGATGTTCGTAGCAGTGATCCTTATGTTGTTATCAAGATGTATAATCAGAAACTTAAGACTCGTATGATTAGAAAGGATGTTAATCCTGAGTGGAATGAAGATGTTACTCTTTCTGTTATAGATCCTAATCACCCAGTGACATTGACTGTGTATGATTATGATACTTTTAGCAAAGATGACAAAATGGGAGATGCGGAATTTGACATCTCGGCCTACATAGAAGCCCTGAGGATGAACGTAGCCGGCCTTGCAAACGGCACCGTAATCAAACGGATACAACCAAGCAAGCACAACTGCCTTGCCGACGAGAGCTGTATCTATTATTCCAATGGCAAAATTATCCAAGATATGATCCTTAGATTGCAAAATGTAGAATGTGGTGAAGTGGAAATCAGCTTGACCTGGATTGATCTTCCTGGTTCTAAAGGTTTATAA 531 0.4011 MEESTEAPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMYNQKLKTRMIRKDVNPEWNEDVTLSVIDPNHPVTLTVYDYDTFSKDDKMGDAEFDISAYIEALRMNVAGLANGTVIKRIQPSKHNCLADESCIYYSNGKIIQDMILRLQNVECGEVEISLTWIDLPGSKGL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3304 176 Gene3D C2 domain 13 174 IPR035892 -
Mal6g3304 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 175 IPR044562 -
Mal6g3304 176 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 8 175 - -
Mal6g3304 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 168 IPR035892 -
Mal6g3304 176 CDD C2_ArfGAP 16 159 - -
Mal6g3304 176 SMART C2_3c 18 113 IPR000008 -
Mal6g3304 176 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Mal6g3304 176 Pfam C2 domain 17 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3304 Mal-Chr6 95972232 95974339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3304 49 176 C2H2 Transcription Factor Family AT1G70790 60.000 4.65e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3304 - - gmx:100810504 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5010 1 120729650 120731845 Mal6g3304 6 95972232 95974339 ECH
Mal6g3304 6 95972232 95974339 Mal6g3304 6 95972232 95974339 ECH