Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3287 ATGAGCTTGGTCTTTGACATAACCTTTTTGTATGTGGTTTTGTTCTTTATTTCATTGAACATAGTCTTGTGTATTGAAATTGAAATCAAGGATTTCCATCGAGAAGAAAGAGATGCTTTGTTACTCATAAGGGATTCTTTAAATTCTTCATCTATCAATTTGCATAGAAATTGGACAGGACCACCTTGTATAAACAACCTTAGTAGATGGTTTGGTATCACTTGTTCAAATTGGCATGTTGTTCATATTACAATTCAAGGTGTCAACCTTAGTGGCTATTTACCTTCCACATTCCTTCAAAACATAACTTTCTTGAGGCAACTTGATTTAAGAAACAATGCACTTTTTGGACTATTGCCAAATCTTACAGGTTTGGTTTTCTTAGAAGAAGTGAAGCTTTCATTTAATCATTTTTCAGGTTCAATACCTTTGGAATATGTTGAATTGCATAGTCTTAAAGTTTTGGAGCTGCAAGAAAATTACTTAGAAGGTGAAATTCCATATTTTGATCAACCATCATTGACAAGTTTCAATGTGTCATATAATCATTTGGTAGGGAAAATTCCTTTAACTTTTGTGCTTCAAAGGTTTCCAAAGGGTTCTTTTGATGATAATTCAGATCTTTGTGGATATCCATTGGATAAGTCATGTCCTGCTGAATCTCCTGCACCACCTCCTTTTGCTATTCCACCTAGTCCTTCAATGGAAACAAATAAGAAGAGGTTTCATGTTTGGATTATTGCTTTGATTGCTATTGCAGCTTCTTTGTTTCTTTTTCTGATGATTATTGCTTTCTTGTTTTGTAAAAGACGAGTTAGAGGAAATGAAACAAGAATAAATGATTCAGCAAGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTATCTATTGCAGGAAACAGTGAAGATTCTGAAAAATTAGGCCAATTAGAATTTTCAAACAAGAAATTTCAAGTTTTTGATATGGATGATTTGTTAAGGGCATCAGCAGAAGTGCTAGGAAGAGGAGATTTTGGTGTTACATATAAAGCAACACTTGAAACTGGTAATGTTGTTGCAGTAAAGAGACTTAGCTACATGAATGAATTGAGCAAGAAGGAATTTATTCAGCAGATGCAATTGCTAGGAGAGATAAAGCATGAAAATGTAGCTGAAATTATCTCCTTTTATCATTCAGAAGATCAAAAGCTTGTCATATATGAACTTGTCTCTGATGGCACTTTGTCTGAGCTCCTACATGAGGGTAGAGGAATTGGAAGAATACCTCTTGATTGGACAACAAGACTTGCCATTATCAAAGACATAGGAAAAGGTCTTGATTTCCTTCATCAATTTTTGTCTACTCACAAGGTTCCACATGCAAATCTCAAATCATCAAATGTTCTAATCCAACAAGACAACCAAGGTTACCATTCCAAACTCACAGATTATGGCTTCTTACCTTTACTCTCATCATCTAAGAAAAATGCAGAAAAGTTAGCAATAAGCAAGTCACCAGAATTTGTTAAAAGGAAAAAATTGACACACAAAACTGATGTATATTGTTTTGGTATCATTATGCTAGAGATTATAACAGGAAAAATTCCTGGTCATATATTAGGCAGTGAAGTTGAAGAAACAACTAATGATCTTTCAGATTGGGTTAGAACTGTGGTGAATAATGATTGGTCTACAGATATATTTGATTTGGAAATATTAGCAGAAAGAGAAGGACATGATGCAATGTTGAATTTAACTGAGATAGCATTGGAGTGTACTGATATGATGCCTGAGAAAAGGCCTAAAATGAGTTTAGTGTTGAAGAGAATTGAAGAGATAGAACAAATGATAAAAGACAATGACTGA 1845 0.3404 MSLVFDITFLYVVLFFISLNIVLCIEIEIKDFHREERDALLLIRDSLNSSSINLHRNWTGPPCINNLSRWFGITCSNWHVVHITIQGVNLSGYLPSTFLQNITFLRQLDLRNNALFGLLPNLTGLVFLEEVKLSFNHFSGSIPLEYVELHSLKVLELQENYLEGEIPYFDQPSLTSFNVSYNHLVGKIPLTFVLQRFPKGSFDDNSDLCGYPLDKSCPAESPAPPPFAIPPSPSMETNKKRFHVWIIALIAIAASLFLFLMIIAFLFCKRRVRGNETRINDSARYVFGAWAKKMVSIAGNSEDSEKLGQLEFSNKKFQVFDMDDLLRASAEVLGRGDFGVTYKATLETGNVVAVKRLSYMNELSKKEFIQQMQLLGEIKHENVAEIISFYHSEDQKLVIYELVSDGTLSELLHEGRGIGRIPLDWTTRLAIIKDIGKGLDFLHQFLSTHKVPHANLKSSNVLIQQDNQGYHSKLTDYGFLPLLSSSKKNAEKLAISKSPEFVKRKKLTHKTDVYCFGIIMLEIITGKIPGHILGSEVEETTNDLSDWVRTVVNNDWSTDIFDLEILAEREGHDAMLNLTEIALECTDMMPEKRPKMSLVLKRIEEIEQMIKDND* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3287 614 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Mal6g3287 614 ProSiteProfiles Protein kinase domain profile. 327 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3287 614 Gene3D Ribonuclease Inhibitor 33 219 IPR032675 -
Mal6g3287 614 SUPERFAMILY Protein kinase-like (PK-like) 330 608 IPR011009 -
Mal6g3287 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 608 - -
Mal6g3287 614 Gene3D Phosphorylase Kinase; domain 1 293 402 - -
Mal6g3287 614 SUPERFAMILY L domain-like 35 193 - -
Mal6g3287 614 Pfam Protein kinase domain 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3287 614 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Mal6g3287 614 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Mal6g3287 614 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3287 Mal-Chr6 95556259 95560055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3287 36 606 Receptor kinase-like Gene Family AT1G48480 35.238 1.05e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal6g3287 Pkinase 2.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3287 - - gmx:102668068 878.241