Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3276 ATGACAACACCAACCTTATCACACATGAAACAATCATTTCACTTTGTTCTGACTTTGTTACTCTTTTTATTAAACCAAACAAATTCTCAGTCACATGTCTATGATCAAGAACACAAAGTCCTATTAAACATTAAACAATACTTTCAAAACACTTCTTTCCTTAACCATTGGACACCATCATCAAATTCCAATCACTGTTCTTGGAAAGAAATCACTTGCACAAGCACAAATGATTCTGTCACTGGAATAACACTTTCACACATGAATATCACACAAAAAATTCCACCCTTTATTTGTGATGAACTCAAAAGCCTTACACATGTTGACTTCAGTTTCAATTTCATCCCTGGTGATTTTCCAACACTTTTTTATAATTGTTCAAAGCTTGTTTACTTAGACCTTTCTTTGAACAATTTTGATGGTATTATTCCTAATGATATTGGAAATTTGAGTACTAGTTTGCAATATCTTAATCTTGGTTCAACAAATTTTCATGGTGGTGTTCCTGATGGGATTGGAAAGTTGAAGGAATTGAGAGAATTTAGAATTCAATATTGTTTATTGAATGGTACTGTTTCTGATGAGATTGGTGAATTGTTGAATCTTGAGTATTTTGATTTGTCTTCTAATGCAATGTTTCCTTCTTGGAAATTGCCTTTGAGTTTGACCAAGTTGAAAAAATTGAAGGTTTTTTATGTTTATGGCTCTAACTTGATTGGTGAAATACCTGAAAGAATTGGAGATATGATTTCTTTGGAGAAGTTGGATATGTCAGGAAATGGTTTAACTGGTGAAATTCCTAGTGGTTTGTTCTTGCTGAAGAATCTGAGTATACTTTTTCTTTACAATAACAAGCTTTCTGGTGAAATACCTAATTTGGTCGAAGCATTGAATTTGACTAGCCTTGATCTTGCTAGGAACAATTTTGAAGGGAAAATACCTGAAGATATTGGAAAGCTTCAAAAGTTAACATGGTTGAGTTTGTCTCTCAATAGTTTATCAGGGGTGATACCAGAAAGTATAGGCCTTCTTCCGTCTCTTGTCGATTTTCGTGTTTTTTCGAACAATTTATCAGGTACTATTCCTCCTGAATTCGGTCGCTTTTCAAAGCTCAAAACCTTTCATATTTCCATGAATAGTCTTATTGGAAAGTTACCTGAGAATTTATGCTATTATGGTGAGTTATTCAACTTGACAGCTTATGAAAATAGTCTTAGTGGTGAATTACCAAAATCTCTAGGAAATTGTAGTAGATTGTTAGACTTGAAAATTTATAGTAATGAGTTTTCTGGTACTATTCCTAGAGGTCTTTGGACATTTGTCAATTTGTCAAATTTCATGGTAAGCAATAATAAGTTCAATGGTGTGATTCCAGAAAGATTGTCTTTAAGTGTTTCGCGGTTCGAGATAGGTAACAATCAGTTTTCTGGTAGAATTCCATCTAGTGTATCTTCATGGACTAATGTCGTAGTTTTTGATGCAAGGAAAAACTTGTTAAATGGAAGTATTCCAGAAGAGTTAACATCACTTCCAAAATTAACAACTCTCTTGCTTGATCAGAATCAGTTCACTGGTCAAATTCCGTCGGATATAATATCATGGAAGTCATTAGTAACTCTTAATTTGAGCCAAAACCAACTTTCTGGACAAATTCCAGATGCAATTGGAAAATTGCCTGTCTTAAGTCAACTTGATTTGTCGGAAAATGAATTTTCCGGCGAAGTTCCTTCTCAACTTCCAAGACTCACCAATCTCAATCTATCCTCTAATCATTTGATAGGAAGGATTCCAAGTGAATTTCAAAATTCAGGGTTTGCTACAAGCTTTTTGGCTAATTCTGGTCTTTGTGCTGATACACCAATACTAAACATCACTTTGTGCAACTCTGGTATTCAAAGTGAAAACAAAGAATCATCATGGTCTATTGGTTTGATTATATGCCTTGTGATAGTAGCAATCTTATTGGCTTTTTGTGCTGCTTTCTTGATTATCAAAGTTTTCAAGAAAAGAAAGCAAGGTTTGGATAATTCATGGAAGCTTATTTCCTTTCAGAGGCTTAGTTTCAATGAATCAAGCATTGTCTCATCAATGACAGAACAAAATATTATTGGAAGTGGCGGATATGGCACGGTATACCGAGTTGATGTCGATGGTTTAGGCTATGTTGCTGTGAAAAAGATAAGGAGTAACAAAAAGTTAGACGATAAACTCGAGAGTTCATTTCGCGCGGAAGTTAAAATCCTGAGCAATATTCGTCATAACAACATTGTGAGATTGTTGTGCTGTATCTCTAATGATGATTCTATGCTTCTTGTTTATGACTATCTTGAAAAACATAGTCTAGATAAGTGGCTGCACATGAAGAGTAAGTCATCATCATCAACTTTGTCAGGCTTAGTACAACATCAGGTGGTTCTTGATTGGCCAAAGAGGTTGAAAATAGCAATTGGTGCTGCTCAAGGTTTGAGCTACATGCATCATGATTGTTCACCACCTATTGTTCATAGAGATGTTAAAACAAGTAACATACTTTTGGATGCTCATTTCAATGCAAAAGTTGCTGATTTTGGACTTGCTAGGATTTTAATCAAGCCAGAGGAATTTAACACAATGTCAGCTGTTATTGGCTCATTTGGCTACATTGCTCCAGAATATGTTCAAACAACAAGAGTTAGTGAAAAGATTGATGTGTTTAGCTTTGGAGTTGTCCTATTGGAACTAACAACTGGTAAAGAAGCTAACTATGGAGATCAATACTCGTCTCTTTCGGAGTGGGCGTGGCGACACATTTTGTTAGGAAGCAATGTAGAAGAATTACTTGACAAAGATGTGATGGAAGCAAGTTACATGGATGAAATGTGTACAGTTTTCAAACTTGGTGTCATGTGTACTGCAACATTGCCTTCTAGTAGGCCTTCCATGAAAGAAGTGTTGCAGACATTGCTCAGCTTTGCAGAGCCATTAGCTTATGGAGAGAAGAAAGTTGGACACTACTATGATGTTGATCCTCTTCTTAAGGATTCAAAAAGTGATAGTACTAGGTTGGATGTTGATGATGATAGTATGTGA 3069 0.3526 MTTPTLSHMKQSFHFVLTLLLFLLNQTNSQSHVYDQEHKVLLNIKQYFQNTSFLNHWTPSSNSNHCSWKEITCTSTNDSVTGITLSHMNITQKIPPFICDELKSLTHVDFSFNFIPGDFPTLFYNCSKLVYLDLSLNNFDGIIPNDIGNLSTSLQYLNLGSTNFHGGVPDGIGKLKELREFRIQYCLLNGTVSDEIGELLNLEYFDLSSNAMFPSWKLPLSLTKLKKLKVFYVYGSNLIGEIPERIGDMISLEKLDMSGNGLTGEIPSGLFLLKNLSILFLYNNKLSGEIPNLVEALNLTSLDLARNNFEGKIPEDIGKLQKLTWLSLSLNSLSGVIPESIGLLPSLVDFRVFSNNLSGTIPPEFGRFSKLKTFHISMNSLIGKLPENLCYYGELFNLTAYENSLSGELPKSLGNCSRLLDLKIYSNEFSGTIPRGLWTFVNLSNFMVSNNKFNGVIPERLSLSVSRFEIGNNQFSGRIPSSVSSWTNVVVFDARKNLLNGSIPEELTSLPKLTTLLLDQNQFTGQIPSDIISWKSLVTLNLSQNQLSGQIPDAIGKLPVLSQLDLSENEFSGEVPSQLPRLTNLNLSSNHLIGRIPSEFQNSGFATSFLANSGLCADTPILNITLCNSGIQSENKESSWSIGLIICLVIVAILLAFCAAFLIIKVFKKRKQGLDNSWKLISFQRLSFNESSIVSSMTEQNIIGSGGYGTVYRVDVDGLGYVAVKKIRSNKKLDDKLESSFRAEVKILSNIRHNNIVRLLCCISNDDSMLLVYDYLEKHSLDKWLHMKSKSSSSTLSGLVQHQVVLDWPKRLKIAIGAAQGLSYMHHDCSPPIVHRDVKTSNILLDAHFNAKVADFGLARILIKPEEFNTMSAVIGSFGYIAPEYVQTTRVSEKIDVFSFGVVLLELTTGKEANYGDQYSSLSEWAWRHILLGSNVEELLDKDVMEASYMDEMCTVFKLGVMCTATLPSSRPSMKEVLQTLLSFAEPLAYGEKKVGHYYDVDPLLKDSKSDSTRLDVDDDSM* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3276 1022 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1013 - -
Mal6g3276 1022 SUPERFAMILY RNI-like 296 602 - -
Mal6g3276 1022 Pfam Leucine Rich Repeat 581 602 IPR001611 GO:0005515
Mal6g3276 1022 Pfam Leucine Rich Repeat 298 320 IPR001611 GO:0005515
Mal6g3276 1022 SMART LRR_typ_2 249 273 IPR003591 -
Mal6g3276 1022 SMART LRR_typ_2 510 534 IPR003591 -
Mal6g3276 1022 SMART LRR_typ_2 579 602 IPR003591 -
Mal6g3276 1022 SMART LRR_typ_2 535 558 IPR003591 -
Mal6g3276 1022 SMART LRR_typ_2 320 343 IPR003591 -
Mal6g3276 1022 Gene3D Transferase(Phosphotransferase) domain 1 776 995 - -
Mal6g3276 1022 ProSiteProfiles Protein kinase domain profile. 697 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3276 1022 SUPERFAMILY L domain-like 46 383 - -
Mal6g3276 1022 SMART serkin_6 697 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3276 1022 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Mal6g3276 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Mal6g3276 1022 Gene3D Ribonuclease Inhibitor 33 186 IPR032675 -
Mal6g3276 1022 SUPERFAMILY Protein kinase-like (PK-like) 693 981 IPR011009 -
Mal6g3276 1022 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1013 - -
Mal6g3276 1022 Gene3D Ribonuclease Inhibitor 187 294 IPR032675 -
Mal6g3276 1022 Gene3D Ribonuclease Inhibitor 295 394 IPR032675 -
Mal6g3276 1022 CDD STKc_IRAK 703 981 - -
Mal6g3276 1022 Gene3D Phosphorylase Kinase; domain 1 676 775 - -
Mal6g3276 1022 Pfam Protein kinase domain 699 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3276 1022 ProSitePatterns Protein kinases ATP-binding region signature. 703 726 IPR017441 GO:0005524
Mal6g3276 1022 Gene3D Ribonuclease Inhibitor 395 634 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3276 Mal-Chr6 95441026 95444268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3276 37 1022 Receptor kinase-like Gene Family AT5G25930 48.137 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal6g3276 Pkinase 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3276 - - gmx:100813894 1417.14