Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3273 ATGGCATCATCAACTCCTCCTCAAGTCATAACCTGTAAAGCTGCAGTGGCATGGGGAGCTGGAGAGGCATTGGTAATGGAGGAAGTAGAAGTCAGTCCACCTCAACCATTGGAGATTAGGATTAAGGTTGTTTCCACCTCTCTCTGTCGTAGTGATCTTTCTGCTTGGGAAACTCATGCCATATTTCCTCGCATATTTGGCCATGAAGCATCTGGGATTGTTGAGAGTGTAGGGCTAGGAGTGACTGAATTCAAAGAAGGGGATCATGTATTAACAGTTTTCATTGGAGAATGCATGTCATGCAGGCTGTGCAAATCAGGGAAAACTAATATTTGTCAAGTTTTGGGATTGGAAAGAAAGGGTTTAATGCACAGTGATCAAAAGACAAGATTTACAGTAAAAGGGAAACCTGTTTATCATTATTGTGGTGTTTCAAGTTTTAGTGAATATACAGTTGTCCATTCTGGATGTGCAGTCAAAGTCAGTCCTCATGTGCCTCTTGAGAAAATATGCCTTCTTAGTTGTGGTGTTGCTGCAGGTTTAGGTGCAGCATGGAATGTTGCTGATGTGACAAAAGGATCAACAGTGGTTATATTTGGTCTTGGAACTGTTGGCCTTTCTGTTGCACAAGGTGCAAAACTTAGGGGTGCTTCTAGAATAATTGGTGTTGACAACAATCCACAGAAGTGCGAAAATGCTAAGTCTTTTGGGATTACTGAAGTAGTTGATCCGAATTCGTACAAAGAACCTATCGTGCAGGTTATTAAGCGCATTACTGATGGTGGGGCAGATATCTGTTTTGAATGTGTAGGGGACACTGATATGATAACCACTGCATTGCAATCATGCTGCGATGGTTGGGGATTGACTGTAACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCAGCTCACTATGGACTACTCCTGACAGGAAGAACATTAAAAGGATCTCTATTTGGAGGATGGAAACCTAAAACTGATCTTCCTTCATTGGTAGAGAAGTATGTGAACAAGGAAATCCAGATTGATGACTATATAACACACAATTTGACATTTGATGACATTAACAAAGCTTTCAAACTCATGAAGGAAGGAAAGTGTCTTCGTTGTGTTATCCATATGCCAAGATAG 1134 0.4136 MASSTPPQVITCKAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWETHAIFPRIFGHEASGIVESVGLGVTEFKEGDHVLTVFIGECMSCRLCKSGKTNICQVLGLERKGLMHSDQKTRFTVKGKPVYHYCGVSSFSEYTVVHSGCAVKVSPHVPLEKICLLSCGVAAGLGAAWNVADVTKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCENAKSFGITEVVDPNSYKEPIVQVIKRITDGGADICFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLTGRTLKGSLFGGWKPKTDLPSLVEKYVNKEIQIDDYITHNLTFDDINKAFKLMKEGKCLRCVIHMPR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3273 377 CDD alcohol_DH_plants 10 374 - -
Mal6g3273 377 SUPERFAMILY GroES-like 326 374 IPR011032 -
Mal6g3273 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Mal6g3273 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 339 IPR036291 -
Mal6g3273 377 PANTHER ALCOHOL DEHYDROGENASE 6 375 - -
Mal6g3273 377 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 6 375 - -
Mal6g3273 377 SUPERFAMILY GroES-like 5 185 IPR011032 -
Mal6g3273 377 Pfam Alcohol dehydrogenase GroES-like domain 38 160 IPR013154 -
Mal6g3273 377 Pfam Zinc-binding dehydrogenase 204 325 IPR013149 -
Mal6g3273 377 Gene3D - 15 370 - -
Mal6g3273 377 Gene3D - 180 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3273 Mal-Chr6 95420602 95425350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3273 15 112 Monolignol Biosynthesis Gene Families AT2G21730 37.143 7.11e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3273 K00001 - gmx:100819938 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3273 6 95420602 95425350 Mal6g3273 6 95420602 95425350 ECH