Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3266 ATGGATGTGGATGAAATTCTTCGTATTTTTCAAGTACCACAGCAAGGTGAAGGTGAATTTGATGGGAGTGAATATGAGGGTAATTGTTCTTTACCAGATAGTATGGCTTGTTCTTCTGAAGAAGATTTAGATTTTGAAGACACTAACGTTGAGGGTACCGGATGCAATTTTGAATCTGAAACAGCTGTGGACTCGGTTGCTGATGTAGAGGAAATTAACTTCAAAAAAATCAGTATTGAGAAAGTAATGAGGTACCATTTTTTAAATCGCGAAGTTGCATTTATGTTCTATAACTGGTATCCTTTTATTAGGAATATTAATGGTGAAGTGGTCCAACAAACATTTATTTGTCATCGGGAAGGCATGAGGGAGGAGAAATACATAAATTCGACATCTCGTAAGATAGAACACAAACCATTGAGTAGGTGTGGATGTCAAGCAAGAATACAAGTTCACCTTGATAATGGTAGCCAACGTTGGTACGTTAAACTTTTTGATGATGAACATAACCATTCCTTTGTTAAAGAAAAGTTTCAGAGGATGCTTCCTGCGCATAGAAAGATGAGTGAGTACGACAAATATCAAATGAACACAATGAGGAAAGCGGGAATTCAAACAACAAAAATTTATGGCTACTTTGCCTCTCAGGCTGGTGGCTATGAGAATGTTGGGTACTCTAGAAGAGACATGTATAATGAACAATTCAAGAAAAGAGGGTCTAGGAATTCTGATGCTGAAGGAGCTCTAGATTTCCTCAAGGGTATGTGCTCAAGGGATGATATGATGTTTTGGAGGCACACAATTAATGCGGATGGAACACTCAAACATTTGTTTTGGTGTGATGGTGTAAGTCGCATGGACTACTCGGTTTTTGGTGATGTGTTGGCCTTTGATGCAACATATAGGAAAATTAAATACAACACACCGTTAGTCATATTTTCTGGGGTAAACCATCATAATCAGAGCATTATTTTTGGTAGTGCAATTGTGGGTGACGAAACTGAAGACACATATGTTTGGCTTTTGGAGACTTTTGTTGAAGCGATGGGAGGGAAGCGCCCGGTATCAGTTATAACTGACGGAGATTTAGCGATGAGAAATGAAATTAGAAGGATTTTTCCTAAAGCTCATCATCGTCTCTGCGCTTGGCATTTGATAAGAAATGCCACTACTAACATTAAAAACCCTCAATTTGTTCCCAGGTTTAAACATTGTATGTTGGGTGATGTTGATGTTGACGTGTTTGAGCGTAAGTGGGCTGATCTAGTTACTGATTTTGGTTTGGAAGAAAACCTCTGGATGTTGGAGATTTTTTTTGCAGGGTTCAGAACGACCTCTCGATGTGAGGGTTTGCATTCTGAATTTGGAAAATATGTCTCAGTTCTTACAAACTTGAGAAACTTTTTACAACAATTTTTTTGCTGGTTGAGTTACCTAAGATATAGAGAGATAGAGGCTGATTTTTCATCTTCTTTTGGTGATGTTGTCCTTCAGACTCAACACCAACATTTAGAAAGATCAGCTTCTAAGTTGTACACTAGGTCAATATTTAGGTTGGTCCGAACCATGTTGGAAAGAGCTTGTCGTTGTAAGGTAGAAGGGGTATCACAAAGTGGTTCAGTTTTTAACTACACTGTGTATAGATATCCTAGACAAGATATTGAATGGGTTGTTTCATTTTGTCAACAAAAACTCTACTTTGAATGTACCTGCAAGAGACTTGAGACATTGGGAATTGCTTGTGAGCATGTGATGTCTGTTTTGATTTACTTGAACATTGTAAACTTGCCTGATTGTATAGTGCTACATAGGTGGACCAAATCTGCTAAGGATGCGATTAACGCCTCAAATGCAAATAGTTCGAGTCAGAGGAACCCTGCATTCATAACATCATATGTTACATTTGTAAAGAGATGTAAGAGGATGGTTAATGCAGCTTTTGAATGTGGCAAGCCAGAATTTCTGCGTAGTTCAATTGAAATGGTTGAGAAGCAAACAAAATTGTTGGAAGCACTTGGTAGAGGTGAACCTGTGTCTGAGTTAGGTGTTGGAACAAAAGGCTCAATAGGGAATCCACCACGGCTGAGGCGAAAGGGGGGCACGAGTGCTTCATCATATGTGTTAGAAACTGGTACATCAAAGCGGAGAGCAAATAAGTGTGGACTATGTGGTATTGTGGGTCACAACCGTCAATCGTGCTTAGCCGAAGCGAAGCACGTCGTCAATCAGAACAACTTTATATGGAATCATTTATCTATGGTGAAGATTATGTTGACGAAGACGATGATTGTTGCAACATTGACATGGTATGTTTAA 2316 0.389 MDVDEILRIFQVPQQGEGEFDGSEYEGNCSLPDSMACSSEEDLDFEDTNVEGTGCNFESETAVDSVADVEEINFKKISIEKVMRYHFLNREVAFMFYNWYPFIRNINGEVVQQTFICHREGMREEKYINSTSRKIEHKPLSRCGCQARIQVHLDNGSQRWYVKLFDDEHNHSFVKEKFQRMLPAHRKMSEYDKYQMNTMRKAGIQTTKIYGYFASQAGGYENVGYSRRDMYNEQFKKRGSRNSDAEGALDFLKGMCSRDDMMFWRHTINADGTLKHLFWCDGVSRMDYSVFGDVLAFDATYRKIKYNTPLVIFSGVNHHNQSIIFGSAIVGDETEDTYVWLLETFVEAMGGKRPVSVITDGDLAMRNEIRRIFPKAHHRLCAWHLIRNATTNIKNPQFVPRFKHCMLGDVDVDVFERKWADLVTDFGLEENLWMLEIFFAGFRTTSRCEGLHSEFGKYVSVLTNLRNFLQQFFCWLSYLRYREIEADFSSSFGDVVLQTQHQHLERSASKLYTRSIFRLVRTMLERACRCKVEGVSQSGSVFNYTVYRYPRQDIEWVVSFCQQKLYFECTCKRLETLGIACEHVMSVLIYLNIVNLPDCIVLHRWTKSAKDAINASNANSSSQRNPAFITSYVTFVKRCKRMVNAAFECGKPEFLRSSIEMVEKQTKLLEALGRGEPVSELGVGTKGSIGNPPRLRRKGGTSASSYVLETGTSKRRANKCGLCGIVGHNRQSCLAEAKHVVNQNNFIWNHLSMVKIMLTKTMIVATLTWYV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3266 771 Pfam FAR1 DNA-binding domain 105 174 IPR004330 -
Mal6g3266 771 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 106 624 IPR031052 GO:0006355
Mal6g3266 771 MobiDBLite consensus disorder prediction 683 702 - -
Mal6g3266 771 Pfam MULE transposase domain 294 388 IPR018289 -
Mal6g3266 771 PANTHER OS02G0262500 PROTEIN 106 624 - -
Mal6g3266 771 ProSiteProfiles Zinc finger SWIM-type profile. 544 592 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3266 Mal-Chr6 95348272 95350788 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g3266 MULE 9e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3266 - - adu:110280242 548.125