Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3264 ATGGTGGCAAAAGCATCATACGAAGAGAGTCGCCGGAAAAGAATGGAAGAGAACAGGAAGAGAATGGAAGCTCTTAATCTTACCCAGCTCTCTCAATCTCTTCACAAATCACCCATTTCAAAACCCTCACCTTCCAAACCTCGCACCATCCGGAAAGAGCTCGTTGTTGTCCGACGCTCCGGCCGTGTCGCTAACCTGCCCGCTCCCATTTACAAAGAAGTTCTTATTGATCGCGTCATAATGCCTAGAAATAGAACTTCAAGAGGAGGTTATAATATGTACAGGGATTATTCGAAGCGTGTATATGCCTCGGATGAAGCTAGAGCGGAAGCATTGGTGAAGGCTGATAAATTGCTATCTGATTTAGATTCTGATCATCCAACTTTTGTTAAGACAATGCTCCAATCTCACGTCACTGGTGGATTCTGGCTGGGCCTTCCAGTTCAGTTCTGCAAGAAAAACCTTCCAAAACGGGACGAAGTGATGACTTTAATTGATGAGGATGGGGATGAGTCTCCAACTACATATTTGGCTCAAAAAACGGGACTTAGCGCCGGATGGAGAGGTTTCGCTATTGCTCATCACCTTGTTGACGGGGACGCTTTAATTTTTGTGTTAGTTAAACACACTGCATTCAAGGTGTACATTATTAGAGTGAATGAGGGTAAACAGAACGAGTGA 681 0.4449 MVAKASYEESRRKRMEENRKRMEALNLTQLSQSLHKSPISKPSPSKPRTIRKELVVVRRSGRVANLPAPIYKEVLIDRVIMPRNRTSRGGYNMYRDYSKRVYASDEARAEALVKADKLLSDLDSDHPTFVKTMLQSHVTGGFWLGLPVQFCKKNLPKRDEVMTLIDEDGDESPTTYLAQKTGLSAGWRGFAIAHHLVDGDALIFVLVKHTAFKVYIIRVNEGKQNE* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3264 226 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 2 222 IPR044837 -
Mal6g3264 226 ProSiteProfiles B3 DNA-binding domain profile. 129 220 IPR003340 GO:0003677
Mal6g3264 226 MobiDBLite consensus disorder prediction 1 20 - -
Mal6g3264 226 MobiDBLite consensus disorder prediction 27 47 - -
Mal6g3264 226 SMART B3_2 129 220 IPR003340 GO:0003677
Mal6g3264 226 CDD B3_DNA 127 218 IPR003340 GO:0003677
Mal6g3264 226 PANTHER B3 DOMAIN-CONTAINING PROTEIN 2 222 - -
Mal6g3264 226 SUPERFAMILY DNA-binding pseudobarrel domain 122 220 IPR015300 -
Mal6g3264 226 Pfam B3 DNA binding domain 129 218 IPR003340 GO:0003677
Mal6g3264 226 Gene3D - 104 222 IPR015300 -
Mal6g3264 226 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3264 Mal-Chr6 95328090 95331646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3264 3 226 B3 DNA Binding Superfamily AT3G19184 53.913 4.57e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal6g3264 B3 4.4e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3264 - - gmx:100797091 291.197