Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3210 ATGTGTTTTGACCTCAAGTCCGCTGCACAAGGTTTTGTCCTTAGTTGCAGTGCAACGGACTTGAGATCAGAACATTATGATTTAGCAGTTCCTATGACATCATCAGGTGAAGTTGCTGCGAAGATGGATAAAGAAGAAAATGTAAACAATGGTGAGGATGTCCATGATATAGAAAATGATGGTAGCTTGGATGGGAATGATGATCAAATTGGAAGGTATTGGTCACAGTATTCTGAAAGGAACATGACGTATGAAGAACCACTTCTTGTGAAGAGAATTAACACTACCTCTCAGATCGCCATAGTTGGTTCCAACCTTTGCCCTATTGAAAGCCTTGACTACGAGATTTTTGATAATGAAATGTTTAACCAGGACTGGAGGTCCAGGAAGAAGGTTCAGATATTCCAATATGTGGTACTTAAATGGGTATTTGCTCTTCTTATTGGATTAGGAACCGGACTCGTTGGTCTTTTCAATAATATTGCTGTTGAAAACATAGCTGGTTTCAAGCTACTTCTCACAACCAGTCTCATGTCTAAACAAAGATATTTTGAGGCTTTTCTAGCATATGCTGGTCTCAATATGGTTTTAGGAGCAGCGGCTGCAGCACTCTGTGCTTTCATTGCTCCATCGGCAGCAGGCTCTGGCATTCCGGAGGTTAAAGCGTATCTCAACGGTATTGATGCTCACTCTATACTCGCTCCAGCCACACTTTTTGTCAAGATTGTTGGTTCCATCCTTGGAGTGTCTGCTGGATTTGTGGTGGGAAAAGAAGGACCTATGGTTCATACAGGAGCTTGCATAGCTTCATTTTTGGGGCAGGGCGGATCTCAAAAGTATGGTTTGACTTGCAGTTGGCTTAGGCAATTCAAAAATGATCGAGACCGGCGAGACATGATTACTTGCGGTGCAGCTGCTGGTGTTGCTGCCGCCTTTCGATCTCCAGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAGCTTCTTGGTGGAGGAGTGCTCTTCTTTGGAGGACATTTTTTACTACAGCAGTAGTTGCTATTACTTTAAGAGCTGGAATTCAGTTTTGTTCAACAGGAAAATGTGGACTATTTGGCGAAGGTGGTCTTATATTGTATGATGTTGGTTCAGCCCAAGTAACATTTAGTGCCGGTGACATAGTAGCAGTAATAGTCTTGGGAACTGTTGCTGGTATTCTTGGAAGCACATATAATTTCCTCGTTGATAAGGTCGTTCGTACATATAGCATCATCAATGAAAAAGGTCCATTTTTCAAAATCTCTCTTGCTGTTACAATTTCTCTTTTGACGTCATGCTGTTATTATTTCTTACCATGGATTGCAACCTGTATCCCTTGTCCTACCGATTCAAAGGTGCCTTGTCCCTCTATTGACGAATCAGGAGAATACAAAATCTTTCAATGTCCACCGGGATACTACAACGATCTCGCTTCCCTCTTTCTAAACACCAACGACGATGCCATTCGTAATCTATTCAGTCCTAAGATAAACAAAGAGTTTCATATTTCAAGTTTATTTATCTTCTTTGCCGCCGTTTACTTTCTTGGAATACTCACTTATGGTATTGCTGTTCCATCTGGACTTTTCATTCCTGTGATACTTGCCGGGGCTGCGTACGGCCGTGTTCTCAGTAGACTCTTCGAACCGATCACACAACTCGACAGAGGATTCTTTTCTCTCCTAGGAGCTGCCTCCTTCCTTGGTGGCACCATGAGAATGACAGTCTCAATTTGTGTTATATTACTTGAACTCACTAATGATCTCTTGTTACTTCCACTTGTGATGTTGGTCTTATTAATCTCAAAATCTGTGGCTGATATCTTCAACAAAGGTGTCTATGATCAAATCTTGAAGATCAAAGGACTTCCTTATTTGGAAGCACATGCCGAACCTTACATGAGGAATATAGCTACGCGTGATGTTGTCTCGGGTCCATTAATGACCTTTTCTGGCATCGAAAAGGTCGGTAATATATTACATGTTTTGAATACTACAGGGCACAACGGGTTTCCGGTCATTGATGAACCGCCTTTCGTGGATGCACCAGAGTTGTGTGGACTCGTACTGAGGTCTTATTTACTAGTTTTATTAAAGGCTAAAAATTTTACAAGAGAGAAGGTTTTCGCGAATCCGAGTATCTTAGAGAATATTTCTGTGTTGGATTTTGGAAAGGCGGGATCGGGAAAGGGAGTTAAACTAGAAGACTTAGATATTCAAGATGAAGACTTGGATATGTATGTTGATCTTCATCCCATAACTAATACTTCGCCGTACACTGTGGTTGAGACGATGTCACTTGCGAAAGCCGCTATTCTTTTCCGCCAACATGGACTCAGACACATGTGTGTTGTTCCAAAGAGCCAAGGGAGACCACCAATTGTTGGGATTCTAACGCGCCACGATTTGATGCCGGAGCATGTTTTGGGACTTTACCCTGATATCAAGCATCACAAATGGCACTGA 2481 0.422 MCFDLKSAAQGFVLSCSATDLRSEHYDLAVPMTSSGEVAAKMDKEENVNNGEDVHDIENDGSLDGNDDQIGRYWSQYSERNMTYEEPLLVKRINTTSQIAIVGSNLCPIESLDYEIFDNEMFNQDWRSRKKVQIFQYVVLKWVFALLIGLGTGLVGLFNNIAVENIAGFKLLLTTSLMSKQRYFEAFLAYAGLNMVLGAAAAALCAFIAPSAAGSGIPEVKAYLNGIDAHSILAPATLFVKIVGSILGVSAGFVVGKEGPMVHTGACIASFLGQGGSQKYGLTCSWLRQFKNDRDRRDMITCGAAAGVAAAFRSPVGGVLFALEEAASWWRSALLWRTFFTTAVVAITLRAGIQFCSTGKCGLFGEGGLILYDVGSAQVTFSAGDIVAVIVLGTVAGILGSTYNFLVDKVVRTYSIINEKGPFFKISLAVTISLLTSCCYYFLPWIATCIPCPTDSKVPCPSIDESGEYKIFQCPPGYYNDLASLFLNTNDDAIRNLFSPKINKEFHISSLFIFFAAVYFLGILTYGIAVPSGLFIPVILAGAAYGRVLSRLFEPITQLDRGFFSLLGAASFLGGTMRMTVSICVILLELTNDLLLLPLVMLVLLISKSVADIFNKGVYDQILKIKGLPYLEAHAEPYMRNIATRDVVSGPLMTFSGIEKVGNILHVLNTTGHNGFPVIDEPPFVDAPELCGLVLRSYLLVLLKAKNFTREKVFANPSILENISVLDFGKAGSGKGVKLEDLDIQDEDLDMYVDLHPITNTSPYTVVETMSLAKAAILFRQHGLRHMCVVPKSQGRPPIVGILTRHDLMPEHVLGLYPDIKHHKWH* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3210 826 SUPERFAMILY Clc chloride channel 119 634 IPR014743 -
Mal6g3210 826 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 72 824 - -
Mal6g3210 826 SUPERFAMILY CBS-domain pair 635 809 IPR046342 -
Mal6g3210 826 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 72 824 - -
Mal6g3210 826 CDD ClC_6_like 110 631 - -
Mal6g3210 826 Pfam CBS domain 760 809 IPR000644 -
Mal6g3210 826 PRINTS Plant CLC chloride channel signature 340 350 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g3210 826 PRINTS Plant CLC chloride channel signature 482 498 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g3210 826 PRINTS Plant CLC chloride channel signature 326 334 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g3210 826 PRINTS Plant CLC chloride channel signature 115 123 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g3210 826 PRINTS Plant CLC chloride channel signature 358 365 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g3210 826 CDD CBS_pair_voltage-gated_CLC_euk_bac 645 811 - -
Mal6g3210 826 PRINTS Chloride channel signature 580 599 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 PRINTS Chloride channel signature 530 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 PRINTS Chloride channel signature 210 227 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 PRINTS Chloride channel signature 562 578 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 PRINTS Chloride channel signature 241 260 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 PRINTS Chloride channel signature 305 324 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 PRINTS Chloride channel signature 618 632 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 Gene3D - 632 810 IPR046342 -
Mal6g3210 826 Pfam Voltage gated chloride channel 198 612 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g3210 826 Gene3D Clc chloride channel 133 631 - -
Mal6g3210 826 ProSiteProfiles CBS domain profile. 758 820 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3210 Mal-Chr6 94186591 94192347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3210 53 820 Ion Channels AT5G49890 69.780 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3210 K05016 - gmx:100809070 1249.57