Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3191 ATGCCCATCATGAAAAAGAATTCTGAGCAGAATCGTTTTAGCGCTGTATTCAACATGCTGATGAACGACCTTGGGGAAACTGTTGATTTTGAACTTCCAGATTCGATTAAGACCAGGACAACGCAGTATACCCATATAAAGCGCAATATATATGTCACTAAGAAGGGCAAGAGAAAGAGTGATGATGGCATATTCTGTTCTTGCGAATCCTCATCTGATTCTACTGTTGTATGCGGTAGAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGTTCTTCAGGCTGCAAATGTGGAATCTCATGTCTCAACAAAGCTTTTCAGCATCGTCCTGTGAAAAAGATGAAGCTGGTTAAGACTGAGAAATGTGGCTCTGGAATTGTGGCAGATGAAGATATCAAGCTTGGGGAGTTTGTCATTGAATATGTTGGAGAAGTTCTCGATGACAAAACATGCGAACAGAGGCTTTGGAATATGAAAGATCGCGGGGAAACAAACTTTTACTTATGCGAAATCAATCGGGATATGGTGATAGATGCGACATATAAGGGAAATAAATCCAGATATATCAACCATAGTTGCTGCCCGAACACTGAGATGCAAAAATGGATTATAGACGGTGAAACAAGAATCGGCATATTTGCAATTCGTGACATAAAGAAGGGCGAGCATCTGACCTATGACTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTTCAGTGCAGGCTTAAGTTGGGTGCGCGACCTACCAAGCCTAAAATGTCTTCAGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAGAATGGAAGCCTGCAAACTGGTAGTTCTCGGTTTGTTGACCATTCAAAATGCTTACACAATTGCATCGATGAAGTTATTATGATAAAACAACTTGGAAATGTGAGATTTGGGATTATTAAATGGTTCGATGAATATTCCCGAAAACACAAGATCATGTTTGAGGATGGTTGTGTTGAAATTTATGACATGTCAAAAGAAGATTGGGAACTAGTGAGATTTTGA 1044 0.4013 MPIMKKNSEQNRFSAVFNMLMNDLGETVDFELPDSIKTRTTQYTHIKRNIYVTKKGKRKSDDGIFCSCESSSDSTVVCGRDCHCGMLLSSCSSGCKCGISCLNKAFQHRPVKKMKLVKTEKCGSGIVADEDIKLGEFVIEYVGEVLDDKTCEQRLWNMKDRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFAIRDIKKGEHLTYDYQFVQFGADQDCHCGAVQCRLKLGARPTKPKMSSDAALKLVAYQVYQNGSLQTGSSRFVDHSKCLHNCIDEVIMIKQLGNVRFGIIKWFDEYSRKHKIMFEDGCVEIYDMSKEDWELVRF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3191 347 ProSiteProfiles Post-SET domain profile. 235 251 IPR003616 -
Mal6g3191 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 7 344 - -
Mal6g3191 347 Gene3D SET domain 13 268 IPR046341 -
Mal6g3191 347 SUPERFAMILY SET domain 38 247 IPR046341 -
Mal6g3191 347 CDD SET_ASHR3-like 113 251 - -
Mal6g3191 347 SMART shorttest3 61 111 IPR006560 GO:0005634|GO:0018024
Mal6g3191 347 Pfam SET domain 123 228 IPR001214 GO:0005515
Mal6g3191 347 SMART set_7 112 235 IPR001214 GO:0005515
Mal6g3191 347 ProSiteProfiles AWS domain profile. 61 110 IPR006560 GO:0005634|GO:0018024
Mal6g3191 347 ProSiteProfiles SET domain profile. 112 229 IPR001214 GO:0005515
Mal6g3191 347 PANTHER SET DOMAIN PROTEINS 7 344 - -
Mal6g3191 347 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 289 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3191 Mal-Chr6 93741299 93748696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3191 43 247 C2H2 Transcription Factor Family AT2G23740 30.078 3.74e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal6g3191 SET 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3191 - - gmx:100808183 600.127