Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3158 ATGGCTCTAGGTAGCCTGGCTTATCTTGGAGTACCTTGGAGAATGGAATTCGCATGGTTTGTAGCAAGGCATAGGCAAGCATGGCATCGCATAGCATATTTGCATGCTTACAAGGCAAACAAACCAGCTCTTGTGCACCAAAACATCTCAGCCGAGAAAGTGCTCATCGATCAGCGACAGAATCCGGTGCTCTCGGATTCCGGCCTATATAAGCTTCTCACCAATGACATTGTCTTCTCTTCACTAAAGGGTAGTTCTGCAAAGGGTTACCTTGCTCCTGAATATACTACCACAGGCCGGTTCACCGATAAAAGCGATGTCTACGCTTTTGGGATCCTTCTGTTCTAG 348 0.4713 MALGSLAYLGVPWRMEFAWFVARHRQAWHRIAYLHAYKANKPALVHQNISAEKVLIDQRQNPVLSDSGLYKLLTNDIVFSSLKGSSAKGYLAPEYTTTGRFTDKSDVYAFGILLF* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3158 115 Gene3D Transferase(Phosphotransferase) domain 1 10 115 - -
Mal6g3158 115 Pfam Protein tyrosine and serine/threonine kinase 31 115 IPR001245 GO:0004672|GO:0006468
Mal6g3158 115 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 31 115 - -
Mal6g3158 115 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3158 115 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 31 115 - -
Mal6g3158 115 SUPERFAMILY Protein kinase-like (PK-like) 4 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3158 Mal-Chr6 92709140 92710539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3158 31 113 Receptor kinase-like Gene Family AT1G53420 44.578 1.90e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mal6g3158 PK_Tyr_Ser-Thr 6.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3158 - - gmx:100789253 160.229