Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3132 ATGGCATCATCATCTCTTAAGCCTTCTGGTTCCAATGATATTGGTTGGCGGTGGAATTATTTCAAAGACGAGAGAAGAAAAGAAGTTATTTGTGTTTTCTGTAAACACCCTTCAAGTGGAATTACACGAGCTAAAAAGCATCAAGCAGGAATAACGGGGGACGTCAAACCGTGTACGAAAACACCTCCGGATGTAAAACAGATTCTGCAAGACCATTTTGATGAAAAGCAAGCCGCTAAGGATGCGTCTTCTGGGCCTGCAAAGGAGTTCCCAATGCCGACTCCAGCAAGTGCGCCGATTCCAGATAGTACAAAGGGACAGAAGAAGGGGGGTAGGCAGTATGAATCGGGCAGTAAGGTAGTACTGTCACCTATGCCGATTTCATCAGCACTTCCGGTAACTGCAGATTTTTCAGCCTCAACAAGGGGAGAAGGATTTAATGATTTTGAAGATGATGGGACATCATACTCCATTGGTTCCCATTTCACACATCACGCCTTTAAAGTGAATTCTGGCGAGGATGTTGCTGCAAGAATTTCCCTTCTCGCTCTAGAATTCCATTCTATATCCATTCTATCTGGATCTGGCACTATTTCAAGCTTTACACTTGGTTCGTCGGATTCTTGTAGTGAGATTTTGAAATATGAGGGAATTTTTGATCTACTTTCTTTGACTGGATCGTTTGAACCAAATAAAGATGGGTTAACAGATACAAGATCTGGGATGCTGACTGCCTCTTTGGCCTTTCGAAATGGTCAGGTTATTCAGGGTCAACTGGCTGGTTCGCTGGTAGCTGCAGGTCCTGTGAAGGTTGTGGTTGCGAGCTTTTGTCCTCCCAAGAAGCGGGCGCAGGAGAGAGGCAAGGAGACTGCAAATCAATCTTAA 885 0.4463 MASSSLKPSGSNDIGWRWNYFKDERRKEVICVFCKHPSSGITRAKKHQAGITGDVKPCTKTPPDVKQILQDHFDEKQAAKDASSGPAKEFPMPTPASAPIPDSTKGQKKGGRQYESGSKVVLSPMPISSALPVTADFSASTRGEGFNDFEDDGTSYSIGSHFTHHAFKVNSGEDVAARISLLALEFHSISILSGSGTISSFTLGSSDSCSEILKYEGIFDLLSLTGSFEPNKDGLTDTRSGMLTASLAFRNGQVIQGQLAGSLVAAGPVKVVVASFCPPKKRAQERGKETANQS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3132 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 78 288 - -
Mal6g3132 294 MobiDBLite consensus disorder prediction 42 117 - -
Mal6g3132 294 Gene3D - 163 291 - -
Mal6g3132 294 ProSiteProfiles PPC domain profile profile. 159 294 IPR005175 -
Mal6g3132 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 279 - -
Mal6g3132 294 MobiDBLite consensus disorder prediction 67 82 - -
Mal6g3132 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 78 288 IPR039605 GO:0003680
Mal6g3132 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 276 IPR005175 -
Mal6g3132 294 CDD DUF296 165 276 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3132 Mal-Chr6 91505876 91508737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3132 87 289 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 37.281 1.70e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3132 - - mtr:MTR_6g060670 366.311