Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3113 ATGGAAGAAAGAGAGATTTTTGGTTCTGGGCATGCTGTTAATGTTAACCAGGCCCCACCAGGCTTCAATTTAGCTCAAAATTCGTTGAATTTTTCTGGGCAGACAGTAGAGTTGCCGGCGCCGGTTGCCGGTGGTGTGGAGGTGAAGAAGAAGAGGGGCAGGCCTAGAAAGACTGAATCTGGAAGTAAGCCGGCGTTGTCGCCGATGCCAATTTCGGCCAGTATTCCGTTGACTGGAGATTTCTCTGGCTGGAAAAGTGGTGGTGGTGGAGGGAAGCCATTTGAATCAATCAAGAAGCCTTTGAAGTTGAATGATTTTGATGAAGATGATGGAACGACACCCTTTGGTTTCAATTTCAAAACTCATGTGCTTACAGTAAATTCAGGAGAGGATGTCTCAATGAAAATAATGTCTCTCTCTCAACGAGAATATCATACGATATCCATTCTCTCTGCGACTGGCACAATTTCGAATGTCACACTTCGCCAGTCAGATGCATGTGGTGGTACTTCAACATATGAGGGAATTTTCGAGATTCTTTCCTTGAGCGGCTCATTTGTGCCAACCGAGAATGGATTGACAAAGAGCAGATCTGGTAGAATGAGTGTCTCATTGGCAGGTCCAAATGGTCGTGTTTTTGGGGGTGCACTGGCTGGTTTGCTGGTAGCTGCTGGTTCTGTGCAGGTTGTGGTTGCGAGTTTTTTTCCAGAGCAGGAGAAACCGAAGAGGCAGAGGGTCGATCATTCGGCACCAACTGCCCCTCCTACATCATCTCATATTAATAATCATGTTTCTGCCGAAGAATTAAAAACTGATCTCGGTGGAATGAAGCCTATCATGTCACCGGCCGGCTTTAACTTTGCTTCTTTCGGCAATGGCCAAGGCTCTGGCAACTCATCATCATCTGCGGATGATGAGCATGTCTAA 927 0.4649 MEEREIFGSGHAVNVNQAPPGFNLAQNSLNFSGQTVELPAPVAGGVEVKKKRGRPRKTESGSKPALSPMPISASIPLTGDFSGWKSGGGGGKPFESIKKPLKLNDFDEDDGTTPFGFNFKTHVLTVNSGEDVSMKIMSLSQREYHTISILSATGTISNVTLRQSDACGGTSTYEGIFEILSLSGSFVPTENGLTKSRSGRMSVSLAGPNGRVFGGALAGLLVAAGSVQVVVASFFPEQEKPKRQRVDHSAPTAPPTSSHINNHVSAEELKTDLGGMKPIMSPAGFNFASFGNGQGSGNSSSSADDEHV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3113 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 286 IPR039605 GO:0003680
Mal6g3113 308 MobiDBLite consensus disorder prediction 240 263 - -
Mal6g3113 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 234 IPR005175 -
Mal6g3113 308 MobiDBLite consensus disorder prediction 287 302 - -
Mal6g3113 308 ProSiteProfiles PPC domain profile profile. 115 256 IPR005175 -
Mal6g3113 308 MobiDBLite consensus disorder prediction 287 308 - -
Mal6g3113 308 Gene3D - 120 249 - -
Mal6g3113 308 MobiDBLite consensus disorder prediction 42 72 - -
Mal6g3113 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 237 - -
Mal6g3113 308 CDD DUF296 120 234 IPR005175 -
Mal6g3113 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3113 Mal-Chr6 90387318 90392813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3113 48 246 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 55.251 2.24e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3113 - - cam:101510032 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3113 6 90387318 90392813 Mal6g3113 6 90387318 90392813 ECH
Mal6g3113 6 90387318 90392813 Mal1g1155 1 14516961 14521083 PCT