Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3088 ATGGAAAACTTAATGTGGGTTAGATTGACAATTTTTCTTGTTTTATTTTGGAGTAGAGTATCCAATATTGCAATTGCACAAACTACCAATACAACATATCCTGCAGTGTTTGCATTTGGGGACTCAATATTTGACACAGGAAATAATAACAACCTTATAACTGCAACCAAGTGTAACTTTCCTCCCTATGGAAGGGATTTCTATGGAGGAGCTGCTACCGGAAGATTCGGTAATGGCAGAGTTTTGTCAGATTTGATAACATCGGCATTGGGAGTGAAAGACACATTGCCAGCATTCTTGGACCCATCTTTAACGGCTCAAGACCTTCCTACTGGGGTATGCTTTGCATCAGCTGGATCAGGATTTGACGATTTGACAGCAAACTCACAGGGAGGAGTTTTGACAATGGGCCAACAAATGAACCATTTTGAAGAATACATAGGAAAATTGAGAGCAGTTGTTGGAACAGAAAAAGCAGCTGATATCATATCCAAAGCATTGTTTATAATATCATCAGGAAACAATGATGTTGCATTCGCTTATTCTTTTACTATAAGGCACTTCTTGCCTTTCAATGTATATTCCGGTATGTTAGTTTCGACAGCTGAAAATTTCCTGAAGGGTCTATATCAATTGGGAGCACGACACGTGTGGGTTCTAAGTACACTGCCATTAGGGTGCTTACCTGCAGCTAGAACTGAATTGGGAGGACCATTAAGGGTTTGTGTAGATTTTGAAAATGGGTTAGCAACACAGTACAATGGCATGTTAGAGCAGGGGCTTGCAACTCTTAAAGGATCCCTTCCTGATTATGATCTTAGATTCATTGATGTATATACTCCTATGCTTCGTCTCATACAAAATCCTTTTCCAGCAGGGTTCGTAAATGTGTGGACCGGATGTTGTGGAACTGGAACATTTGAAATGGGAGCTCAATGCAACCTGTTTACGTTCCAATGTCCAAGTACTGCAAACTACTTTTTCTGGGATGTTGCCCATCCTACAGAGAGAGCTTATCAAGCCACTTTAGCTCAAATATTTCAATCTCAAAACTACGATCTTACTAGTTACAATATTTCCCAAACTCTTCATCCTTTCAATGTATCAACCCTTAGTTTTAATCATTAA 1128 0.3945 MENLMWVRLTIFLVLFWSRVSNIAIAQTTNTTYPAVFAFGDSIFDTGNNNNLITATKCNFPPYGRDFYGGAATGRFGNGRVLSDLITSALGVKDTLPAFLDPSLTAQDLPTGVCFASAGSGFDDLTANSQGGVLTMGQQMNHFEEYIGKLRAVVGTEKAADIISKALFIISSGNNDVAFAYSFTIRHFLPFNVYSGMLVSTAENFLKGLYQLGARHVWVLSTLPLGCLPAARTELGGPLRVCVDFENGLATQYNGMLEQGLATLKGSLPDYDLRFIDVYTPMLRLIQNPFPAGFVNVWTGCCGTGTFEMGAQCNLFTFQCPSTANYFFWDVAHPTERAYQATLAQIFQSQNYDLTSYNISQTLHPFNVSTLSFNH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3088 375 Gene3D SGNH hydrolase 23 352 IPR036514 -
Mal6g3088 375 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Mal6g3088 375 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 353 - -
Mal6g3088 375 CDD SGNH_plant_lipase_like 34 348 IPR035669 -
Mal6g3088 375 SUPERFAMILY SGNH hydrolase 163 346 - -
Mal6g3088 375 PANTHER GDSL ESTERASE/LIPASE EXL3 1 353 - -
Mal6g3088 375 Pfam GDSL-like Lipase/Acylhydrolase 36 342 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3088 Mal-Chr6 88974254 88976214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3088 5 348 Pollen Coat Proteome AT1G75910 39.886 1.53e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3088 - - mtr:MTR_1g025910 669.077