Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3061 ATGGAGCCAATTATCATGGAGATCGGTGCTGGAAATGATATTATCCAAACCCTAATCAACTTGGCTCGGAGTCGCCAAGTTGGAATCGTTGTTTTGAGTGGTTATGGTCCTGTCACTGATGTTACCATTCATGAACCAGCTTCTCGTTTCCCTCCTATGTCCATCGAAGGAGTGTCCAATATGACATTACTTTCTGGAGCATACATCAATGCCAATGATGGCATTGATGGCATTGTTCCTCCCCAGACCACGAACAATGGCATATCACTTTCCTTTTTCTCAATTTGCCTCTCTGATGATCGTGGACGGGTGTTCGGAGGAACGGTTGAAGGGAAGGTTATGGCTGCTGGTCCTGTTATGATTACAGCTGCTTTTGTTATTAAACCTACATTTCATAGGTTGGGTAATGTCAATGGGGCTGTTGAAGTAATGGAGAAGGATGAAGAAGCAAAGGATGTTGGTGGTGTTACCATCAATGATGATGCTCAAGCAGCATAA 498 0.4398 MEPIIMEIGAGNDIIQTLINLARSRQVGIVVLSGYGPVTDVTIHEPASRFPPMSIEGVSNMTLLSGAYINANDGIDGIVPPQTTNNGISLSFFSICLSDDRGRVFGGTVEGKVMAAGPVMITAAFVIKPTFHRLGNVNGAVEVMEKDEEAKDVGGVTINDDAQAA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3061 165 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 134 - -
Mal6g3061 165 ProSiteProfiles PPC domain profile profile. 1 147 IPR005175 -
Mal6g3061 165 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 124 IPR005175 -
Mal6g3061 165 Gene3D - 2 150 - -
Mal6g3061 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 156 IPR014476 GO:0003680
Mal6g3061 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 156 - -
Mal6g3061 165 CDD DUF296 3 127 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3061 Mal-Chr6 87101134 87101631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3061 1 134 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 33.582 1.53e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3061 - - mtr:MTR_8g078930 174.481