Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3060 ATGGGATACCTTGATCCTGAGTACTACAAATTAAGGAACTTGAATGAAAAAAGTGACATCTATAGCTATGGAATTGTTCTATTGGAATTAATCACAGGTCTCCCTGCAGTGATTAAAGGCAAGCCATCAATGCACATACTTGAATTTGTAAGACCACAACTTCAAAAGGGTGACTTGAGTACAATTATAGATGTAAGACTCCAAGGAAAATTTGATGTAAATACAGCATGGAAAGTTTTAGGATTAGCAATTGCATGCACTGCATCAACCTCAATTAAGAGACCAACAATGAGTGTTGTGTTAGCTGAGCTGAAACAATGTGTTAGAATGGAGTCCCCTAGTGACAGGGAACTATTTGTGCCACCAAGAAATATCTATAATGCATCTGAAGCATTTAATTCCATAGGTAGTGAATCTATGACATATTCTTTCCCTAGGTAA 441 0.3673 MGYLDPEYYKLRNLNEKSDIYSYGIVLLELITGLPAVIKGKPSMHILEFVRPQLQKGDLSTIIDVRLQGKFDVNTAWKVLGLAIACTASTSIKRPTMSVVLAELKQCVRMESPSDRELFVPPRNIYNASEAFNSIGSESMTYSFPR* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3060 146 Pfam Protein tyrosine and serine/threonine kinase 3 102 IPR001245 GO:0004672|GO:0006468
Mal6g3060 146 SUPERFAMILY Protein kinase-like (PK-like) 2 131 IPR011009 -
Mal6g3060 146 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 1 116 - -
Mal6g3060 146 PANTHER OS07G0107800 PROTEIN-RELATED 1 116 - -
Mal6g3060 146 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Mal6g3060 146 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3060 Mal-Chr6 87089473 87090545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3060 1 108 Receptor kinase-like Gene Family AT2G19190 55.046 1.09e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mal6g3060 PK_Tyr_Ser-Thr 8.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3060 - - lja:Lj0g3v0276029.1 203.371