Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3042 ATGGCTTACTCTAAAATTCTCTTTTTCTTAATCCTTGTTAGATTCCTCTCTTTTGCAACTATCAAGGCACAATCTCCAACTTTTGTGTATTCCTCTTGTTCCTCCAATGTTACCACAGCCAACAGCCCTTTCCAAGTCAATCTCAGGACCCTCCTCTCTTCCTTGTCATCAAAAGCCACAGGCAACACCGAATTCTACAACACCACCATCACTAGTGTAAATCCCTCTGATTCTATCTATGTATCGTTCATGTGCAGAGGTGACATACCCTCTCTGCTCTGTCATGAATGCGTAGTTAATGCAACCCAAAAACTATCCGATTGCTCTTTGTCCAAACAAGCTATCATTTGGTACGACGAGTGCATGGTTCGATACTCCAACAACTCTTTCTTTTCCACCGTTTCTAAAAGTCCTGGTTTTTACATGCGGAACCAACTCAATGTCTCAAACACAAAAAGCTTCATGCCTTTATTGATTTCGACCTTGAATCAAACTGCAGATGAAGCAGCACGTCCAGTTATTTGGGACAGAAACAAGAAGTTTGCCACAAGTAATGCATCTGTTTCAAAATCTCAGACCCTTTACTGTCTAGCTCAGTGCACGCCGGACTTGTCGCCCAATGATTGCAGAACCTGTCTCAGTAGTGCTATTGCGGATCTTCCACTGTATTGTGATGGAAAGGTGGGCGGGAGAGTTCTTTTCCCTAGCTGTAATGTTAGGTATGAACTATATCCTTTTTATAGCTCTGTTAATGCTCCTTCACCAAATGAGCTTGTTCCTGAGACAAATGATTCAAAACAAGATTCTAGATTTTCACAAGATCCATTCTATCTTTCCTATAATTGCACAAAAAACCACAGTACAATAACTAACAAAAACTTCAAGTTACTTCTCTCTTATTTGTCTTCCAACGCCACAAATGGCAAAAAATTCAATAAAATTGAAGTGGAAGAAATGGTGTATGGCCTCTTCTTGTGTCGAGGTGACCTTCCTGTTCGCCTCTGCGGTCAATGTGTGAAAAATGCAACGGATCAAATATACTCAAAGTGTCTTGAATCCCCAAAGGGTATAATTTGGTACAGCCACTGCTTGCTTCACTATTCTGATCAGAATTTCTTCTCTAACATCGAAACAAGTCCTATGTATCGCAATATAAATATCACTGAATATTCCTTCACGGACCAAAACTTGTTCACCAGTACATTATCGAATCAATTATCTCAACTTGCGAGTGATACAGGCGATAGTGATGAAAGATATATGACTAATTCACTAAAACTGAATGATGTGCAAACCTTGTATACTCTTGGACAATGTACGCGGGATTTGTCTAGTCAGGATTGTACTTCTTGTCTAAAGGATGTGATCTCTACATCAATTCCGTGGTCAAATTTGGGTAGTGTTGGGGGAAGAATTATATATCCTAGCTGTAATCTAAGGTTTGAATTGTTCCAATTTTACATGGACGGCGACGAAGCTCAGCCACCTGGGATTCCTTCTCCATTACCCAAAAATACAGATAAACGAAAAATTATCTTCATTGTTGTCCCTACCATTATTTTGCTGATGCTCTTTTCTATTGGCTATTATTTGCTAAAGAAGAAGAGAAGAAAAAGTCGTAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCCACTTTAGAACCACTACAATTCGATTGGGTGGTAATTGAAGCAGCAACCAACAACTTTTCTAATGACAATTACATTGGCAAAGGCGGATTTGGAGAGGTTTACAAGGGTATCCTTTTTGATGGACGAGAAGTAGCTATCAAAAGGCTTTCAAAAAGTTCTAAGCAAGGTGTAGAAGAGTTCAAGAATGAAGTTTTATTGATAGCCAAGCTTCAACATAGAAATCTAGTGGCATTTATTGGTTTTTGCCTTGAAGAACATGAGAAAATACTTATTTATGAATTTGTGCCCAACAAAAGTCTTGATTACTTTTTATTTGATTCTCAACAGCAAAAGTTGTTAACTTGGTTTGAACGTTTCAACATTATAGGAGGAATTGTTCGAGGAATTCTGTATTTGCATGAACTTTCTCGACTTAAAGTTATACATCGGGATCTCAAACCTAGCAATATTCTATTAGACGAAAATATGATTCCTAAAATTTCAGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGATGAGGGAAATACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCGGAATATGCAATGCTTGGACAATTTTCTGAAAAATCCGACATTTATAGTTTTGGAGTTATGCTTTTAGAGATTATTGCTGGAAAGAAGAATAAAAGTTCATTTACTCCACACCATGTTGCTGATGGTCTCTTGAACTATGTATGGAGACAGTGGATGGATGAAACACCTTTAAGTATATTGGACCCAAAAATTAAAGAAGATTATTCTAAAACTGAAGTCATTAAGTGCATTCAGATTGGTCTATTATGTGTTCAAAATGACCCGGATGCTAGACCTTCAATTGTGACAGTTGCTTCCTACCTTAGCAGTTATGCAATTGAATTACCAACTCCACATGAACCTGCGTTTTTCTTGCATGGTAGAACTTATTCAAATGTTCTTGCACAAGAATCAAGTTCTACTCAATCTGCCAATAGTTCTGCACTTTTCTCAAACAATCAAATGTCTGCAAGTACTTTTGTTCCTCGATAG 2700 0.377 MAYSKILFFLILVRFLSFATIKAQSPTFVYSSCSSNVTTANSPFQVNLRTLLSSLSSKATGNTEFYNTTITSVNPSDSIYVSFMCRGDIPSLLCHECVVNATQKLSDCSLSKQAIIWYDECMVRYSNNSFFSTVSKSPGFYMRNQLNVSNTKSFMPLLISTLNQTADEAARPVIWDRNKKFATSNASVSKSQTLYCLAQCTPDLSPNDCRTCLSSAIADLPLYCDGKVGGRVLFPSCNVRYELYPFYSSVNAPSPNELVPETNDSKQDSRFSQDPFYLSYNCTKNHSTITNKNFKLLLSYLSSNATNGKKFNKIEVEEMVYGLFLCRGDLPVRLCGQCVKNATDQIYSKCLESPKGIIWYSHCLLHYSDQNFFSNIETSPMYRNINITEYSFTDQNLFTSTLSNQLSQLASDTGDSDERYMTNSLKLNDVQTLYTLGQCTRDLSSQDCTSCLKDVISTSIPWSNLGSVGGRIIYPSCNLRFELFQFYMDGDEAQPPGIPSPLPKNTDKRKIIFIVVPTIILLMLFSIGYYLLKKKRRKSRRTILRENFGEESATLEPLQFDWVVIEAATNNFSNDNYIGKGGFGEVYKGILFDGREVAIKRLSKSSKQGVEEFKNEVLLIAKLQHRNLVAFIGFCLEEHEKILIYEFVPNKSLDYFLFDSQQQKLLTWFERFNIIGGIVRGILYLHELSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDEGNTNRIVGTYGYMSPEYAMLGQFSEKSDIYSFGVMLLEIIAGKKNKSSFTPHHVADGLLNYVWRQWMDETPLSILDPKIKEDYSKTEVIKCIQIGLLCVQNDPDARPSIVTVASYLSSYAIELPTPHEPAFFLHGRTYSNVLAQESSSTQSANSSALFSNNQMSASTFVPR* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3042 899 Gene3D Transferase(Phosphotransferase) domain 1 648 852 - -
Mal6g3042 899 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 265 489 - -
Mal6g3042 899 ProSiteProfiles Gnk2-homologous domain profile. 378 486 IPR002902 -
Mal6g3042 899 Pfam Protein kinase domain 574 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3042 899 ProSiteProfiles Gnk2-homologous domain profile. 272 372 IPR002902 -
Mal6g3042 899 SUPERFAMILY Protein kinase-like (PK-like) 555 883 IPR011009 -
Mal6g3042 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Mal6g3042 899 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 257 - -
Mal6g3042 899 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 501 890 - -
Mal6g3042 899 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 501 890 - -
Mal6g3042 899 CDD STKc_IRAK 578 844 - -
Mal6g3042 899 ProSiteProfiles Protein kinase domain profile. 572 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3042 899 SMART serkin_6 572 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3042 899 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 265 489 - -
Mal6g3042 899 Gene3D - 380 486 IPR038408 -
Mal6g3042 899 Gene3D - 276 372 IPR038408 -
Mal6g3042 899 Gene3D - 25 130 IPR038408 -
Mal6g3042 899 Gene3D - 139 246 IPR038408 -
Mal6g3042 899 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Mal6g3042 899 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Mal6g3042 899 Gene3D Phosphorylase Kinase; domain 1 533 647 - -
Mal6g3042 899 ProSiteProfiles Gnk2-homologous domain profile. 136 246 IPR002902 -
Mal6g3042 899 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Mal6g3042 899 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Mal6g3042 899 Pfam Salt stress response/antifungal 392 482 IPR002902 -
Mal6g3042 899 Pfam Salt stress response/antifungal 289 369 IPR002902 -
Mal6g3042 899 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3042 Mal-Chr6 85872376 85877252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3042 272 899 Receptor kinase-like Gene Family AT4G05200 43.636 2.07e-173 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal6g3042 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3042 - - mtr:MTR_6g055960 1448.72