Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3032 ATGTGTTGTGTTGCGTATGTTGCTGTGTTTATTGTGCAGCGTGTGAGAAAAATTGAGGGAGATTTCATTAGCTCCAACAATCTTAATCCTTTCAATTGGGTTTTTTCCGCAAGTAATGTTATCGAGGGTTTTTTCTTCATTACCGAGGACGAAGATGCAGAAGACATTGACAATTCGTACTTTGGTTGCAATTTTGAAGCTGAAACTGCCTTGGATTGTAAGATTGATGTTGAGAAAATAAATATAAGGGAAATTAGTTCAGATCAAATGATGAGGTACCATTTTCGGGATCGTGATGTTGCATTTATGTTTTATAATTCATATGGTTGTTTACATGGATTTGGCAGTAGAAGATGTCGTGTTGTCAAGAACACTAAAGGTGAAATCGTTCAACAAACATTTGTTTGCCATAGAGAAGGTATTTGGGATGCAAAGTATACAAATAGTTTGTCTCGTAAGAGAGAGCCTAAACCTACTACTAGGTGCGGTTGTCTCGCAAAACTTCAATATGAGGGCATGCTACCAGCACACAGGAAGATGAGCGATTACGACAAGTACCAATTGAAAACAATGAGGAAATTTGGCATTCCAACGTCACGCATTTATGGCTTTTTTGCTACACAGGCTAGAGGATATGATAATCTAGGTTATTCAAGGAGAGACATGTACAACGAGCAATTCAAGCATAGGGGAAGGAATAGTTCTGATGTTGAGGAAGCAATTGATTTCCTTAAGGAAATGTGTGATAAGGATGATAAGATGTATTGGAGGCACACCGTCAATGAGGATGGATCACTTCGACACTTGTTTTGGTGTGATGGGGTTAGCCGAATGGACTACTTTGTGTTTGGTGATGTTTTGGCATTTGATGCGACATATCAGAAAATAAAATATAATACACCGCTAGTAATTTTTTCAGGAGTAAACCATCATAATCAGAGTGTTATATTTGCTAGAGCAATTGTCAGCGATGAAACAGAAGAAACTTATGTGTGGCTTTTGCATAATTTCGTTGAAGCAATTGAAGGCAAACTACCGGTGTCCGTTATAACAGACGGAGATTTAGCTATGAGAAATGCAATTAGAAAGGTCTTTCCACATGCTGACCATCGCTTGTGTGCCTGGCATCTGATAAGAAATGCATCCAACAATATAAAAGATCCAAAATTTGTACCGAAGTTCAAGCAATGCATGTTTGGTGATTGTGATATTGATGAGTTTGATTGTAAGTGGAAGGATCTGGTGGTTGAATTTGGTTTGGAAGAAAATACTTGGATTCATGAGATGTATGAAAAGCGAAAGATGTGGTCAACAGCTCATATTCGTGGTAGTTTTTTATATAGAGAAATAGAGGCTGATTATGCATCTTCTTTTGGCGAAACTGTTCTTCAAACGCAACACACCTGCTTAGAGAGGTCAGCTTCAAACTTGTATACAAGGTCAATTTTTAAGCTTTTTAGGCCTCTGCTTGAAAGGTCATGCAATTGCAAAGTTGAAGGTGTGGTCCAAAGTGGTTCTATTTTTACTTATGCTGTTTACAAATATCCTAGACAAGATATTCAATGGGATGTATCTCTTGGTCAAGAAAAGTTTATATTTGAATGTTCTTGCAAGAGATTTGAGACATTTGGCATTCCTTGCGAACATGTGATTTCTGTTTTAGTTTATCTTAACATTGTTGTGATGCCTGAATGTCTTGTATTGGAGAGATGGACCAAACATGCAAAACTTGCAATCAATGATATGAATGCCAATAGTTCAAGTCACCGGGATCCTGCATTTATTTGTTCTTACGTTACTTTTGTGGAACGATGTAAGAGGATGGTCAATGCTGCATTTATGTGTGGGAAAGCTGAAATAATACATAGCACCGTTGAAATGGTGGAAAAACACACTGATGTGTTGGAAGCAGTTGGAAGGGGTCAAGTTGATGATGTGTCATTGTTGGGCTTAAATACAGGAGGAAGTGTCGGTAATCCGCCACGGCGTAAAAGAAAAGGGGAAGAAGCTGCATCTTCCTCCTGCATTCCGAAATGTGGAATATGTGGAACAAAGGGTCACAACCGCAAATCATGTCGCTTTCGTGGAGACTCAAATATACCTTCACAGAATCCTTCCACTGATACCTTTAACTACTTCAACGATCAGTTTGGCGAAGATAACGATGAATGGAACCTTTCTATGGATTCTGCTATGCTGATGTTGTGTTGTTTTTGCTCGGTTGTGCTGCTGTTGTTGTAG 2241 0.3869 MCCVAYVAVFIVQRVRKIEGDFISSNNLNPFNWVFSASNVIEGFFFITEDEDAEDIDNSYFGCNFEAETALDCKIDVEKINIREISSDQMMRYHFRDRDVAFMFYNSYGCLHGFGSRRCRVVKNTKGEIVQQTFVCHREGIWDAKYTNSLSRKREPKPTTRCGCLAKLQYEGMLPAHRKMSDYDKYQLKTMRKFGIPTSRIYGFFATQARGYDNLGYSRRDMYNEQFKHRGRNSSDVEEAIDFLKEMCDKDDKMYWRHTVNEDGSLRHLFWCDGVSRMDYFVFGDVLAFDATYQKIKYNTPLVIFSGVNHHNQSVIFARAIVSDETEETYVWLLHNFVEAIEGKLPVSVITDGDLAMRNAIRKVFPHADHRLCAWHLIRNASNNIKDPKFVPKFKQCMFGDCDIDEFDCKWKDLVVEFGLEENTWIHEMYEKRKMWSTAHIRGSFLYREIEADYASSFGETVLQTQHTCLERSASNLYTRSIFKLFRPLLERSCNCKVEGVVQSGSIFTYAVYKYPRQDIQWDVSLGQEKFIFECSCKRFETFGIPCEHVISVLVYLNIVVMPECLVLERWTKHAKLAINDMNANSSSHRDPAFICSYVTFVERCKRMVNAAFMCGKAEIIHSTVEMVEKHTDVLEAVGRGQVDDVSLLGLNTGGSVGNPPRRKRKGEEAASSSCIPKCGICGTKGHNRKSCRFRGDSNIPSQNPSTDTFNYFNDQFGEDNDEWNLSMDSAMLMLCCFCSVVLLLL* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3032 746 PANTHER OS02G0262500 PROTEIN 168 443 - -
Mal6g3032 746 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 467 634 IPR031052 GO:0006355
Mal6g3032 746 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 169 IPR031052 GO:0006355
Mal6g3032 746 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 168 443 IPR031052 GO:0006355
Mal6g3032 746 SMART 26again6 533 560 IPR006564 GO:0008270
Mal6g3032 746 ProSiteProfiles Zinc finger SWIM-type profile. 520 558 IPR007527 GO:0008270
Mal6g3032 746 PANTHER OS02G0262500 PROTEIN 467 634 - -
Mal6g3032 746 Pfam SWIM zinc finger 535 557 IPR007527 GO:0008270
Mal6g3032 746 PANTHER OS02G0262500 PROTEIN 89 169 - -
Mal6g3032 746 Pfam MULE transposase domain 286 380 IPR018289 -
Mal6g3032 746 Pfam FAR1 DNA-binding domain 104 170 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3032 Mal-Chr6 85011438 85016448 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g3032 MULE 3.9e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3032 - - adu:110280242 511.531