Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2999 ATGGCGGAGGAAGAGAACAACGACATTGTCACATATATAGTGAAAATCAAAGTCACACTCACTATCCCAGACCCAGAAGAACCCATTCCTGACGATGCTGATCGAGAAACACTACCTACTTTCAATGTTGGAACTGCTGAAACTACGTCATTGAACAACGGTGAAAGTTCCGTTGAAGCTGATGATGTGGTAGCCGCATCAGTAGAAGAATCTATTCCTGATCGAGAAAAACAAGCTATGAATGTTGGCGCCAATACGGTGGAGTCGCTGTTGACGGACGATGAAATGGCAGCTAAGGATTCTTCCTCAGCTAAAGCTGCTATGGAGATAATGAAACGTGGAAGAAAGAGTTTTGTAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGGGAGCGTTCCTACTAGAAAAAGACCAGCTGGAGGCTCTTCATCGTTTGAACTGGAGAGAAAAAGACGCAGGAGAAAGAGAAAAGCGGAGAAGGAAACCACTGAAAATGAGGTTCCTGAAGTCCACAAGAAACATAATACCAAATTAAGTCCAGGGGAATCCTTAGTGTGTCATCAATGTAAAAGAAATGATAAGGGCAGGGTTATAAGATGCACAAAATGCATCGATCCAAGAATCTACCTTCCTCTTCTCTCTTGTGAGCCGTATCCTAAACTGAAAGAGAGCGATGTTGCCGAGGCATGTCCTGTGTGCTGTAATAATTGCAATTGTAAAGCATGCTTACGATCTTTTAAACTCATTAATGAAATGAAGCATAAGGTCGAAACCAACAAAAATGAGGAATTTGAGTTCTGTAAGTATATGCTGAAAGGACTTCACATTTTTTGTAGTGACAACTGTAAAACATCAATATTTGACTACCACAAAAGCTTTACAGAATGCCCTTTTAACCTTTGTCTCCTCTGCTGTTGTGAGCTCCGTGGTGGGAAGCTTCTAGGTGGTCCAAATCCAATTGATCTCAAGTATATTTTCTTAGGTCGTGATTATCTACATGGTGGAAATGAAGAAAAACAGGTTAAAGAAAATGTATCACATGCTGAGGATGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAACGGCGATGGTAGCATTCCCTGTCCAACAGCTGATAATGAATGTCATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCGAATTTCATCTCCGAGTTAGTATGTAAAGCCAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACATGTGATAATAGGTGTTCTTGCTTAAAATATGTTATTAACGCCGATGATATACACAATAACAGAAGGAAGGCAGCTTTTCATGAAGATTCAAGTGACAAATTTTTATACTGTCCTAGGGCTCCTGTAATTGCAAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCACTAGTCATGTGGCATGCATTCTGTCAAAAAACCAATTCCAAATGCGATGTAGTTTTGGATGTGAAGGCAGTTAATTGCATAGATTGGTGTGAGAGAGATATTAACATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCTTAATTGGCCCGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGAGTTCATAACTTCTTTGCCTTATAAAGAATACTCAAATCGTTTTAGTGGTTCTCTCAACCTTTCTGCGAAGTTGCCGGATTATTGTGTAAAGCCTGACATGGGGCCAACAACATATATTGATTATGGATTTCCTCAGGATCTTGGACGCGGGAATTCAGTGACTAAGCTCCATTGTAACGTGTTTGATGCAGTAAATTTGTTGACGCATATCGCTAAAGTGGAACTGAAACCTGAGGAAATTACTGTCATTAAGAATTTGAGACATAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTTATGGGGAGGAGGTTGATATATTTCATCAACACTCTGGCACTAATGATAGTGACCTGGTGGTTGGAGGGGATCCCACAGAAGGTGCTCTTTGGGATATTTTTCGAAGAGAGGATGTACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAAAGAGTTCAGACATGTTCACTGCAGTCCTTTAAAGCAAGTTATTGACCCCATTCATGATCAGACCATTTATCTGACTATGGAGCATAAGATGAAACTTAAGGAGGAGTATGGAATTGAACCTTGGACTTTTATTCAAAAGCTTGAAGAGGCTGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTAAAGTCATGCATCAAGGTTGCACTTAATTTTGTCTCTCCTGAACATATTGGTGAGGGCTTTCGTTTGACAGAGGAATTTCGCAAACTTCCGATAAATCACAGATCTGCGAAGGACAAGTTTGAGGTGAAGAAAACTGTCATACATGCTATGCTTGATGTGATTGAAAAATTAGAGAAAGCAAGGTCTGGGAAAACCAAGGTTTGTGCATAA 2523 0.4063 MAEEENNDIVTYIVKIKVTLTIPDPEEPIPDDADRETLPTFNVGTAETTSLNNGESSVEADDVVAASVEESIPDREKQAMNVGANTVESLLTDDEMAAKDSSSAKAAMEIMKRGRKSFVEIQKRKMDEEALLGSVPTRKRPAGGSSSFELERKRRRRKRKAEKETTENEVPEVHKKHNTKLSPGESLVCHQCKRNDKGRVIRCTKCIDPRIYLPLLSCEPYPKLKESDVAEACPVCCNNCNCKACLRSFKLINEMKHKVETNKNEEFEFCKYMLKGLHIFCSDNCKTSIFDYHKSFTECPFNLCLLCCCELRGGKLLGGPNPIDLKYIFLGRDYLHGGNEEKQVKENVSHAEDESTTREWSRSGWHANGDGSIPCPTADNECHHGFLELRRILPPNFISELVCKANELAETIKLQDVEETCDNRCSCLKYVINADDIHNNRRKAAFHEDSSDKFLYCPRAPVIASNVLECTSGLSWEPLVMWHAFCQKTNSKCDVVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWLNWPEVLKLKDWPPSNLFQERLPRHHAEFITSLPYKEYSNRFSGSLNLSAKLPDYCVKPDMGPTTYIDYGFPQDLGRGNSVTKLHCNVFDAVNLLTHIAKVELKPEEITVIKNLRHKHLEQDKRELHGYGEEVDIFHQHSGTNDSDLVVGGDPTEGALWDIFRREDVPKLKEYLKKHFKEFRHVHCSPLKQVIDPIHDQTIYLTMEHKMKLKEEYGIEPWTFIQKLEEAVFIPAGLPHQVRNLKSCIKVALNFVSPEHIGEGFRLTEEFRKLPINHRSAKDKFEVKKTVIHAMLDVIEKLEKARSGKTKVCA* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2999 840 ProSiteProfiles JmjC domain profile. 569 798 IPR003347 -
Mal6g2999 840 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 58 831 IPR045109 GO:0032454|GO:0033169
Mal6g2999 840 MobiDBLite consensus disorder prediction 161 180 - -
Mal6g2999 840 Gene3D Cupin 442 807 - -
Mal6g2999 840 SMART cupin_9 550 798 IPR003347 -
Mal6g2999 840 MobiDBLite consensus disorder prediction 130 180 - -
Mal6g2999 840 Pfam JmjC domain, hydroxylase 685 781 IPR003347 -
Mal6g2999 840 SUPERFAMILY Clavaminate synthase-like 510 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2999 Mal-Chr6 83524131 83556249 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal6g2999 JmjC 1.3e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2999 K15601 - gmx:100780803 843.188