Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2993 ATGGCGGAGGAAGAGAACAACGACATTGTTACATATATAGTGAAAATCAAAGTCACACTCACTGTCCCAGACCCAGAAGAACCCATTCTTGACGATGCTGATCGAACACACTACCTACTTTCAATGTTGGCGCTGCTGAAACTGCCTGATGATGTGGTAGCCGCAGCAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATGTTGGCGCCAATACGGTGGAGTCGCTGATGACGGACGATGAAATGGCAGCTAGGGATTCTTCCTCAGTTAAAGCTGCTATGGAGATAATGAAACGTGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGAATGAAGAAGCGTTGTTATGGAGTATAACAAAGGAAGAAAGAGACGTGCTAGCTGGAGGCTCTTCATCGTTTCAACCGGAGAGAAAAAGACGCGGGAGAAAGAGAAAAAAACTTAATACCAAATTAAGACCAGGGGAATCCTTAGCGTGTCATCAATGTAAAAGAAATGATAAGGGAAGGGTTATAAGATGCACAAAATGCAAACGGAGAAGATATTGCATAGCATGTTTAAAGAATCGGTATCCTAAACTGAAAGAGAGCGATGTTGCCGAGGCATGTCCTGTGGGCTGTAATAATTGCAATTGTAAAGCATGCTTACGATCTTTTAAACTCATTAATGAAATGAAGCATAAGGTCGAAACCAACAACAATGAGGAATTTGAGTTCTGTAAGTATATGCTGAAAGGACTTCTTCCACTTTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGATACAAGGCCTCTCACTCTCAACGCTAAATATAAAACCGGCGGATTATTCTAAAGATGCGCGTGTAAGCTGTACAAAATGCCCTTTTAACCTTTGTCTCCTCTGTTGTTGTGAGCTCCATGGTGGGAAGCTTCTATGTGGTCCAGATCCAATTGATCTCAAGTATATTTTCCGAGGTCGTGATTATCTACATGGTGGAAATGAAGAAAAACAGGTTAAAGAAAATGTATCACATGCTGAGGATGAGTCTACGACTCATGAGGGGACAAGATCTGGGTGGCATGCAAACGGTGATGGTAGCATTCCCTGTCCAAAAGCTGATAATGAATGTCATAATGGTTTCCTTGAACTGAGAAGGATATTTCCTCCGAATTTCATCTCCGAGTTAGTATGTAAAGCCAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACATGTGAAAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCTGATGATATACACAATAACACAAGGAAGGCAGTTGTTCATGAAGATTCAAGTGACAAATTTTTATACTGTCCTAGGGCTAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCACTAGTCATGTGGCATACATTCCGTCAAAAAACCAATTCCAAATACGATGTAGTTTTGGATGTGAAGGCAGTTAATTGCATAGATTGGTGTGAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCTCAAGGATTGGCTTAATTGGCCTGAGGAACATTTACCTCGTCATCATGCTGAGTTCATAACTTCCTTGCCTTATAAAGAATACACAAATCCTTTTAGTGGTTCTCTCATGCTTTCTTCGAAGTTGCTGGATTATTTTGTAAAGCCTGACATGGGGCGAAGAACATATATTGCTTATGTATTTCCTCAGGATCTTGGATGTGGGGATTCAGTGACTAAGCTCCATTGTAACGTGTTTGATGCAGTAAATGTGTTTACGCATATCGCTAAAGTGGAACTGAAACCTGAGGAAATTACTGTCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGCGGTTGATATATTTCATCAACACTCTGACACTAATGATAGTGACCTGGTGGTTGGAGAGGATCCCATAGAAGGTGCTCTTTGGGATATTTTTCGAAGAGAGGATATACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAAAGAGTTCAGACATGTTCATTGCAGTCCTTTAAAGCAACTTGGAGATGTTGTTTTCATTCCTGCTGGTTTGCCTCACCAGGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGTGAGTGCTTTCGTTTGACAGAGGAATTCTGCAAGCTTCCGATAAATCACAGATCCGCCAAGGACAAGTTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTGATTGAAAAATTAGAGAAAGCAAGGTCTGGGAAAACCAAGGTTTGTGCATAA 2379 0.4065 MAEEENNDIVTYIVKIKVTLTVPDPEEPILDDADRTHYLLSMLALLKLPDDVVAAAAEESVPDREKQAMNVGANTVESLMTDDEMAARDSSSVKAAMEIMKRGRKSFAEIQKRKMNEEALLWSITKEERDVLAGGSSSFQPERKRRGRKRKKLNTKLRPGESLACHQCKRNDKGRVIRCTKCKRRRYCIACLKNRYPKLKESDVAEACPVGCNNCNCKACLRSFKLINEMKHKVETNNNEEFEFCKYMLKGLLPLLRRLDEEQMIEKEREAKIQGLSLSTLNIKPADYSKDARVSCTKCPFNLCLLCCCELHGGKLLCGPDPIDLKYIFRGRDYLHGGNEEKQVKENVSHAEDESTTHEGTRSGWHANGDGSIPCPKADNECHNGFLELRRIFPPNFISELVCKANELAETIKLQDVEETCENRCSCLKPVSNADDIHNNTRKAVVHEDSSDKFLYCPRASKGEPVIVSNVLECTSGLSWEPLVMWHTFRQKTNSKYDVVLDVKAVNCIDWCERDINIHQFFTGYTRGLKDWLNWPEEHLPRHHAEFITSLPYKEYTNPFSGSLMLSSKLLDYFVKPDMGRRTYIAYVFPQDLGCGDSVTKLHCNVFDAVNVFTHIAKVELKPEEITVIKKLRHKHLEQDKRELHAVDIFHQHSDTNDSDLVVGEDPIEGALWDIFRREDIPKLKEYLKKHFKEFRHVHCSPLKQLGDVVFIPAGLPHQVRNLKSCIKVALDFVSPEHIGECFRLTEEFCKLPINHRSAKDKFEVKKIVIHAMLDVIEKLEKARSGKTKVCA* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2993 792 MobiDBLite consensus disorder prediction 340 360 - -
Mal6g2993 792 MobiDBLite consensus disorder prediction 133 153 - -
Mal6g2993 792 Gene3D Cupin 443 759 - -
Mal6g2993 792 SMART cupin_9 540 750 IPR003347 -
Mal6g2993 792 SUPERFAMILY Clavaminate synthase-like 461 773 - -
Mal6g2993 792 MobiDBLite consensus disorder prediction 340 363 - -
Mal6g2993 792 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 82 783 IPR045109 GO:0032454|GO:0033169
Mal6g2993 792 Pfam JmjC domain, hydroxylase 689 733 IPR003347 -
Mal6g2993 792 ProSiteProfiles JmjC domain profile. 529 750 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2993 Mal-Chr6 83275146 83280124 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal6g2993 JmjC 2.9e-05 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2993 K15601 - gmx:100797799 710.294