Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2962 ATGGCCTCTCTAACAACACTATTCCATCACCACCTCCCACTCTCTTCATCACCCTCCTTCAAACTTCGCAAACCAATACACTCTTTTTCACCCCCACTCTCACCCATTCACCCCTTCAAATTCCAACAAAAAAAACTTTCATCATCATCTCGTCCTCGTTTTCTTCTTTCTCAATCTCTGCCACGTGCTTACATAACTGGACCCGCGGCTGACCCGAATATCACTGACCCGGATCCGAAACTTGATGGGTTGCAACAAGAGGAAGCGGCTATACCAAGAGTTGTAACATGGGAGCTGTTATCTATGCTTTTGATTAAGCATAAATTTCGGATTGCTGTTTGTGTTGCTTCTCTCTTTGCGTGTACTGCCTGTACTCTATCCATGCCCATTTTTTCTGGACGGTTTTTTGAAGTTCTTATTGGTGCTAGACCCGAGCCGTTGTGGAGTCTTCTCAGTAAAATGGGAGTTCTGTATGCACTAGAGCCACTTTTTACTGTTATTTTTGTTATAAACATGAACATAGTATGGGAGAAAGTTATGTCAACACTAAGAGCTCAGATCTTTGGAAAAATATTGATTCAGAAGGTTGAGTTTTTTGACAAATACAAGGTAGGTGAAATCACTGGTTTGTTAACATCTGATTTGGGTTCTCTTAAAGATCTTGTCAGTGAGAATGTTTCAAGGGATCGCGGATTCAGGGCATTATCTGAGGTCACTGGAACATTACTCATACTTTTTACTTTATCCCCTCAACTGGCTCCAATTCTAGCTGTTCTGATGATCGCAGTTTCCATTTCAATTGCTGTCTACAAGAGATCAACAGTGCCTGTTTTTAAATCACACGGTTTGGCCCAAGCATCTATATCTGATTGTATATCGGAAACATTTTCTGCTATTAGAACAGTTCGATCCTTTAGTGGAGAAAAGCGCCAAATGGCTATGTTTGCTAAGCAGGTTTTATCTTTCCAATCAAGCGGTATAAAGCTTGGAACTTTCAAATCCATAAACGAATCCTTGACTAGAGTTGCTGTTTATATTTCTTTAACTGCACTATACTGTCTTGGAGGAAGCAAAGTAAAAGCGGGTCAACTCTCTGTTGGAACTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTCGCTGTTCAAGGATTGGTTAATACTTTTGGAGATCTTCGTGGAACTTTTGCGGCTGTTGAGAGGATCAACTCTGTTTTGTCTGGAGTTCAAGTTGACGATGCCCTTGCCTACGGCTTAGAAAGAGAACTGAAACAAAAAGCAGTGAACGATGAAAACTACAAATTATTCTTCTCTAATAGTTCTGCTGAGAAAAACCAAAATAATCATTTGCATTACATGTCAGCATTAAAAACATCAAGCAATGTGTTTAATTTAGCCTGGTCTGGAGATATTTGTCTTGAAGATGTGTATTTCTCTTACCCTTTAAGGCCAGATGTGGAAATTTTACGTGGCTTAAATTTAAGACTGAAATGTGGAACTGTAACTGCACTGGTGGGTGCTAGTGGTGCAGGAAAAAGTACGATAGTACAACTATTGTCTCGTTTTTATGAGCCAGCAAGAGGCTGTATAACAGTTGGTGGAGAAGATGTACGAACATTTGACAAAAGTGAATGGGCCCGGGTTGTTTCTATCGTAAATCAAGAACCTGTTCTGTTTTCGGTGTCTGTTGGCGAAAATATTGCATATGGGCTTCCAGATGACGATGTTTCTAAAGACGATGTGATTAAGGCAGCAAAGGCTGCAAATGCTCATGATTTTATAATTTCACTTCCACAGGGCTATGATACACTTGTTGGTGAGCGTGGAGGCCTACTGAGCGGAGGACAAAGACAGAGAATTGCCATTGCCCGAGCTCTCCTGAAGAATGCTCCCATCCTTATACTTGATGAGGCTACAAGTGCTCTAGATACAGTGAGTGAGCGATTGGTCCAAGAGGCTCTCAACCATTTAATGAAGGGGAGGACAACATTAGTAATAGCTCACAGATTAAGCACAGTTCAAAATGCATATCAAATTGCACTCTGTTCAGAAGGGAGAATTGCAGAACTAGGCACTCATTTTGAGTTATTGGCTAAGAAGGGCCAATATGCTTCACTGTATGGAGCTGGATAA 2136 0.4073 MASLTTLFHHHLPLSSSPSFKLRKPIHSFSPPLSPIHPFKFQQKKLSSSSRPRFLLSQSLPRAYITGPAADPNITDPDPKLDGLQQEEAAIPRVVTWELLSMLLIKHKFRIAVCVASLFACTACTLSMPIFSGRFFEVLIGARPEPLWSLLSKMGVLYALEPLFTVIFVINMNIVWEKVMSTLRAQIFGKILIQKVEFFDKYKVGEITGLLTSDLGSLKDLVSENVSRDRGFRALSEVTGTLLILFTLSPQLAPILAVLMIAVSISIAVYKRSTVPVFKSHGLAQASISDCISETFSAIRTVRSFSGEKRQMAMFAKQVLSFQSSGIKLGTFKSINESLTRVAVYISLTALYCLGGSKVKAGQLSVGTMASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGVQVDDALAYGLERELKQKAVNDENYKLFFSNSSAEKNQNNHLHYMSALKTSSNVFNLAWSGDICLEDVYFSYPLRPDVEILRGLNLRLKCGTVTALVGASGAGKSTIVQLLSRFYEPARGCITVGGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDDVSKDDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAYQIALCSEGRIAELGTHFELLAKKGQYASLYGAG* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2962 711 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 39 709 IPR039421 -
Mal6g2962 711 ProSitePatterns ABC transporters family signature. 613 627 IPR017871 GO:0005524
Mal6g2962 711 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 39 709 - -
Mal6g2962 711 Pfam ABC transporter 490 641 IPR003439 GO:0005524
Mal6g2962 711 CDD ABC_6TM_TAP_ABCB8_10_like 117 403 - -
Mal6g2962 711 CDD ABC_MTABC3_MDL1_MDL2 472 708 - -
Mal6g2962 711 Gene3D - 470 707 IPR027417 -
Mal6g2962 711 SMART AAA_5 499 673 IPR003593 -
Mal6g2962 711 Pfam ABC transporter transmembrane region 113 382 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g2962 711 SUPERFAMILY ABC transporter transmembrane region 100 403 IPR036640 GO:0005524|GO:0016021
Mal6g2962 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 463 709 IPR027417 -
Mal6g2962 711 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 472 710 IPR003439 GO:0005524
Mal6g2962 711 Gene3D ABC transporter type 1, transmembrane domain 81 409 IPR036640 GO:0005524|GO:0016021
Mal6g2962 711 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 112 395 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2962 Mal-Chr6 81041970 81052286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2962 469 707 Calmodulin-binding Proteins AT2G36910 54.959 1.07e-72 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2962 K05657 - gmx:100791034 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2962 6 81041970 81052286 Mal6g2962 6 81041970 81052286 ECH