Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2938 ATGGATTTTAACAGATCTAACATCAGAGTTTTGGTTGTCGACCATGATGATGTGTCTTTGGCATTACTTTCTAATATACTCATGGCTTGGAAATACAAAGCTCGAACTGCCAAAGATGCTCACCATGCTTTGGTCACTCTTCGAAATTCTCAAGGCTCGTTTGATCTCATAATTAGTGAGTTTCATATATTGGGAATGAATGGATTTAAATTCCAAAAACAAATACAAGATGAATTTCAACTTCCTGTAATAATGATGTCTAAAGACAATAGACTAGATTTCATCTCCATGACTTTAGAACATGGAGCAGTACACTATATTGTGAAACCTTTTTGTGCTGAAGACTTTAGAGACATTTGGAAATATGCCTTGGAAGCAAAGAAAAATAAACTATTTATTGATAGTTTGCTTGTAAAAAGCCAAGAACCAAAGACAATAAGGAAGTATTGTAAAAGAAAGAGTAGTAGTGATGAATACCACCAAGGTGAAGAGGAGATTGAAGTTGTTAAGAAACCAAAGCTTGTTTGGACAGATTATCTTCACAATCGATTTCTTCTTGCTATTAAACAAATTGGATTCGGAAAGGTTGAGCCAAAGAAAATTCTGGAAATCATGAACATTCCGAACTTAACAAGAGAAAATGTATCTAGTCATCTACAGAAGTATCGTATATTTCTACGCGAATTAGAAGGGAAAGGAATGCATGGAGAAATAACTGATAGAGCATTAAGATCAACATTTGCATCGGAACTTCCAATTCCAATGATCAATGAAATTCAACAAAGAAGAAAAACCAAACTCTGCCTGCCGACACGTCGATGTTTGCAAACATTTCCATATCAAGGATCCATGGCTGCTTCTTCTTCTTATTCAAATTTCTTAACAAGGGATTTGAAATTTGGTGACACTAGTTACCAAAATCATTGTTCAATTCGAAATGATTCTTTGAATCATATAAATTATGGTGTGAAAGATTGGAACTTTGTATCTATGAGAAGCTCTAATATTCTGCCTCATAATGTTACTTTTGATGGAATAAATAATAAACCTTTTGGAATTGAAACCAATAATAGATCAGAAGCAATTGGAAGTAGAAGTTTGAGTAAAGGAGGGATTAATAATGTTAGTATAAATGATGCTTCTTCAAATAGAAATAACTTCGGGTTCAATATTATGGATCAAAATTCAAATGTGAATTTTGGATCTTTGGTGAATGAAAAGTTTGATTTGGTTCAAGGAGGGTTTGATTTGGACTCTGTTTCTGATGATAGGGGTGTGGGTGGAAGTGGGTTTCATGCAACATTGGTTAATGAAAGAAATATTTATGAGAATAGTGGATTTCCTTTGCAAAAATTAAAGGGAAAGGTTGTAGAAAACGAGGAAGAGTATAATGGTGCTAATTTCATCAATAAGGTTGAGTTCAACCAAATGGAATTTAACATTTCTGATTCATGGATGGCTAATGATATGAATCTTCACAATGAGTTGAATGAGGACTATGATGCAAGTGGATATCTGAAATCTGACATGTTTGGTTCTTTTCAAGATGTGCAACCCCTTGAGCTGTTACATAAAGATGGAGATAATATCTATCCTCAAGCTGGAAATGCATCATGTGTGTTGAACGAGTTACCAATATGTTCAAATCAAAACCCTAAGCAGTATGGAGGAAATGAAGGATTTTCAAATGGGGAACCATCTGATAGGTTAATGGGGGACAAATTTTCTAATGCAAGTACATCAACTTCTCATCAGGAATTTGATATGGATCTTGTTGAAGCCTTCTTGTTTGGTACTATAGAAGATTAG 1809 0.3416 MDFNRSNIRVLVVDHDDVSLALLSNILMAWKYKARTAKDAHHALVTLRNSQGSFDLIISEFHILGMNGFKFQKQIQDEFQLPVIMMSKDNRLDFISMTLEHGAVHYIVKPFCAEDFRDIWKYALEAKKNKLFIDSLLVKSQEPKTIRKYCKRKSSSDEYHQGEEEIEVVKKPKLVWTDYLHNRFLLAIKQIGFGKVEPKKILEIMNIPNLTRENVSSHLQKYRIFLRELEGKGMHGEITDRALRSTFASELPIPMINEIQQRRKTKLCLPTRRCLQTFPYQGSMAASSSYSNFLTRDLKFGDTSYQNHCSIRNDSLNHINYGVKDWNFVSMRSSNILPHNVTFDGINNKPFGIETNNRSEAIGSRSLSKGGINNVSINDASSNRNNFGFNIMDQNSNVNFGSLVNEKFDLVQGGFDLDSVSDDRGVGGSGFHATLVNERNIYENSGFPLQKLKGKVVENEEEYNGANFINKVEFNQMEFNISDSWMANDMNLHNELNEDYDASGYLKSDMFGSFQDVQPLELLHKDGDNIYPQAGNASCVLNELPICSNQNPKQYGGNEGFSNGEPSDRLMGDKFSNASTSTSHQEFDMDLVEAFLFGTIED* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2938 602 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 171 224 IPR006447 GO:0003677
Mal6g2938 602 Gene3D - 168 229 - -
Mal6g2938 602 SUPERFAMILY Homeodomain-like 169 228 IPR009057 -
Mal6g2938 602 Pfam Response regulator receiver domain 10 118 IPR001789 GO:0000160
Mal6g2938 602 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 511 IPR045279 GO:0009736
Mal6g2938 602 Gene3D - 6 135 - -
Mal6g2938 602 PANTHER RESPONSE REGULATOR 23-RELATED 7 511 - -
Mal6g2938 602 CDD REC_typeB_ARR-like 10 124 - -
Mal6g2938 602 SMART REC_2 8 120 IPR001789 GO:0000160
Mal6g2938 602 ProSiteProfiles Response regulatory domain profile. 9 124 IPR001789 GO:0000160
Mal6g2938 602 SUPERFAMILY CheY-like 6 126 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2938 Mal-Chr6 79683935 79706487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2938 8 247 Response Regulator Gene Family AT5G07210 37.193 2.37e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g2938 Response_reg 2.2e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2938 - K14491 mtr:MTR_7g026400 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2938 6 79683935 79706487 Mal6g2938 6 79683935 79706487 ECH