Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2854 ATGGAAGGAAATGGTGATATGGGACTTATTGGTGAAAATTTTGATTCTGGTTTACTTGGGAGGCTGAGGGATGATGACTATGAAAGCAGGTCTGGAAGTGAGAATTTCGATGGTGCTTCTGGTGATGAACTTGATGCTGGTGATGATCAGCCAAAGAGTAAGAAGAAGAAGAAATATCATAGACACACTCCTCAACAAATTCAGGAGCTCGAAACTTTCTTCAAGGAGTGTCCCCATCCTGATGAGAAGCAAAGAACTGACCTTAGCAGGAAGCTTGGCTTGGCGGGCAAGCAAGTGAAGTTCTGGTTTCAGAATCGGCGAACTCAAATGAAGACACAACTGGAACGCCATGAGAACATGATTCTGAGACAGGAAAATGAGAAGCTCCGAGCTGAGAACAGTGTGATAAAGGATTCTATGTCACATCCGGTATGCAGCAACTGCGGTGGCCCAGCAATTCCTGGGCAAGTTTCATTGGAGGAACACCAGATTAGGATTGAGAATGCCAGACTGAAGGAGGAATTGACCCGAGTGTGTACCTTGTCCAACAAGTTCCTCGGCCGACCACTCTCGGCATTGACCTCAATGACTATGTCGAATCCGAATTCTGGCTTTGAACTTGGTATGGGAAGCAGTAGTGTTGCTGGTTCAAGCAACTTCAACATGTCGTTGCCGATGGGATTTGATATGGGAAACAGAGTTATGGGAACTCCATCGCTACATTCTGGAATGCACTCACCGATGGGAATGCTCGGAAATAATGCTCAGCAGGAGAGATCTATGCTTATTGATCTTGCAATGACTGCAATGGATGAACTGGTCAAGATGTCTGACCAGGATTCTCCTCTCTGGATTAAGAGTTTGGATGGCGTGAAAGAAGTGCTGAACCATGAAGAGTATGCAAGGATCAATTCTCTTTTTAACACTCCGAAACCCAGTAGTTATGTAACTGAAGCTACAAGAGCAACTGGACTGTTACTAGTCAACAGTGCAGGTCTTGTGGATACGATGTTGGATGCAGATCGGTGGTCGGAGATGTTTCCATGTATGATTGCTCAAGCTGCAACCTTGGATGTAATATCTAGTGGAATGGCTGGAACCAGAAATGGAGCTATGCAACTGATGCATGCTGAGATTCAATTGCCTTCTCCATTAGTCCCGGTTCGACAATATACCTTCCTCAGGTTCGCCAAGCAGCATGGAGAAAATGTTTGGGTTGTGGTTGATGTTTCTGTCGACATCGGCCGTAATTCTGCTAATGGAAAACCTTACATGAGCTGTAGGAAGCTTCCTTCTGGCTGTATTTTGCAGGATTTGTCCAATGGTTTATGCAAGATTACTTGGGTTGATCATTCCCAATATGATGATAGTCTTGTCCACCAAGCCTATCGTCCATTGGTTGATTCTGGCCTCGCATTTGGTGCTCATAGATGGGTCGCAACTCTCCAGAGGCAGTGTGATTCCCTTGCAGTCCTCATGTCTTCTGTACCATCCGATGACCCAAACGCTATATGCCCATCCGGTAAGAATAGCATGTTGAAGCTCGCACAACGGATGTCTAATTACTTCTGGTCGGGAGTTTGTCCATCGTCCGCGTCCAAGTGGGAAATCCTTCCCATTAGTAACATGGGCAACAGTGACATGAGAATCACGTCTCGGAAACATCCGGATGCCCATGGTGGAATTGTGCTAAGTGCTGCAACTTCTATTTGGATGCCGGTGTCGCGGCAAAGGTTGTTTGATTTCCTTCGCGATGCGCGGATGAGAGGTGAGTGGGATAGTTTATCCAACGGTGGATCAATGGAGGAGATGGTCCACGTACTTAAAGGACAAACACATGGAAATTCCGTTTCTATCCTTCGTCCCGATAATCCTGCGAATGTGAATGGAAATGATGGCACCGTGCTATACCTACAAGATTCATGGACTGATAGCTCCGGCTCGATGATCGTGTATTCACCAGTCGATGTGCAATCCTTGCAGATGGTGATCGGCGGTGGAGATTCTTCATTTGTTCATCTTTTACCTTCCGGCTTTTCAATTCTTCCGGACGGTCATTCAAACAACACCAATATCGTCGGAACTTCAAGTGATGGTAGCAGCAATGATGGTGACAACGACAACGGAGGATGCTTGCTCACATTCGGATTGCAAATGTTGCTGACCAACCATCCAACAAGTAATCTCACAATGGAATCAGTTGATACCGTTAATTCACTCATCACAGTGACCATTCAGAAAGTCAAAGATTTCGTTGGAGTTGCATGA 2268 0.4586 MEGNGDMGLIGENFDSGLLGRLRDDDYESRSGSENFDGASGDELDAGDDQPKSKKKKKYHRHTPQQIQELETFFKECPHPDEKQRTDLSRKLGLAGKQVKFWFQNRRTQMKTQLERHENMILRQENEKLRAENSVIKDSMSHPVCSNCGGPAIPGQVSLEEHQIRIENARLKEELTRVCTLSNKFLGRPLSALTSMTMSNPNSGFELGMGSSSVAGSSNFNMSLPMGFDMGNRVMGTPSLHSGMHSPMGMLGNNAQQERSMLIDLAMTAMDELVKMSDQDSPLWIKSLDGVKEVLNHEEYARINSLFNTPKPSSYVTEATRATGLLLVNSAGLVDTMLDADRWSEMFPCMIAQAATLDVISSGMAGTRNGAMQLMHAEIQLPSPLVPVRQYTFLRFAKQHGENVWVVVDVSVDIGRNSANGKPYMSCRKLPSGCILQDLSNGLCKITWVDHSQYDDSLVHQAYRPLVDSGLAFGAHRWVATLQRQCDSLAVLMSSVPSDDPNAICPSGKNSMLKLAQRMSNYFWSGVCPSSASKWEILPISNMGNSDMRITSRKHPDAHGGIVLSAATSIWMPVSRQRLFDFLRDARMRGEWDSLSNGGSMEEMVHVLKGQTHGNSVSILRPDNPANVNGNDGTVLYLQDSWTDSSGSMIVYSPVDVQSLQMVIGGGDSSFVHLLPSGFSILPDGHSNNTNIVGTSSDGSSNDGDNDNGGCLLTFGLQMLLTNHPTSNLTMESVDTVNSLITVTIQKVKDFVGVA* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2854 755 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Mal6g2854 755 ProSiteProfiles START domain profile. 255 491 IPR002913 GO:0008289
Mal6g2854 755 SMART HOX_1 55 117 IPR001356 GO:0003677
Mal6g2854 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 752 IPR042160 -
Mal6g2854 755 SUPERFAMILY Bet v1-like 258 488 - -
Mal6g2854 755 Gene3D - 264 488 IPR023393 -
Mal6g2854 755 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 5 752 - -
Mal6g2854 755 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Mal6g2854 755 Coils Coil 107 134 - -
Mal6g2854 755 SUPERFAMILY Homeodomain-like 45 113 IPR009057 -
Mal6g2854 755 CDD homeodomain 60 113 IPR001356 GO:0003677
Mal6g2854 755 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Mal6g2854 755 MobiDBLite consensus disorder prediction 1 64 - -
Mal6g2854 755 CDD START_ArGLABRA2_like 259 486 - -
Mal6g2854 755 Gene3D - 44 129 - -
Mal6g2854 755 MobiDBLite consensus disorder prediction 18 32 - -
Mal6g2854 755 SUPERFAMILY Bet v1-like 515 749 - -
Mal6g2854 755 SMART START_1 264 488 IPR002913 GO:0008289
Mal6g2854 755 Pfam START domain 265 487 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2854 Mal-Chr6 75933679 75938470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2854 1 749 Homeobox Transcription Factor Family AT3G61150 49.740 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal6g2854 START 2e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2854 K09338 - gmx:100794400 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2003 1 26319239 26323419 Mal6g2854 6 75933679 75938470 ECH
Mal6g0664 6 9236794 9242895 Mal6g2854 6 75933679 75938470 ECH
Mal6g2854 6 75933679 75938470 Mal6g2854 6 75933679 75938470 ECH