Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2835 ATGGTGAAATTCTTGAAGCCAAACAAAGCGGTGATCGTCCTACAAGGACGCTATGCCGGCAAAAAGGCTGTCATCGTGAAGAACTTCGATGATGGAACCCGCGACCGTGCTTACGGTCATTGCTTGGTTGCAGGGATCAAGAAGTACCCAGCTAAGGTGATCAAGAAGGATTCGGCGAAGAAAACTGCGAAGAAATCGCGTGTTAAGGCTTTTGTGAAGTTGGTTAACTATCAGCATCTTATCCCGACGCGTTACACTTTGGATGTTGATTTGAAGGAGGTTGTTACCACTGATGTTCTTCAGAGTAAGGATAAAAAGGTTACTGCTTTGAAGGAGGCCAAGAAGAGGTTTGAAGAAAGGTTTAAGACTGGGAAGAATAGGTGGTTCTCTACTAAGCTCAGGTTTTGA 408 0.4485 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRDRAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLIPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFSTKLRF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2835 135 Pfam KOW motif 7 36 IPR005824 -
Mal6g2835 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mal6g2835 135 Gene3D - 1 135 IPR038655 -
Mal6g2835 135 SUPERFAMILY Translation proteins SH3-like domain 2 135 IPR008991 -
Mal6g2835 135 Coils Coil 100 120 - -
Mal6g2835 135 Pfam Ribosomal L27e protein family 52 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mal6g2835 135 CDD KOW_RPL27 6 88 IPR041991 -
Mal6g2835 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 - -
Mal6g2835 135 SMART kow_9 4 31 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2835 Mal-Chr6 75028891 75029298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2835 1 135 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.185 1.75e-82 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2835 K02901 - csv:101212413 233.032