Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2830 ATGCTTAACTTTCACCTCAAAAACTATTACTTTACTTCCCTCACAACAATAACTCCCTTCCTAATCCTTCTTTTCCTAAACCATGTTGAATCACAAGCTTCCATGGAACCAGTTCCTACTGATATCTCTCATCATAAATGGAATCCCTCTTTTGCAATCACAGCTGGTTCGGTACTTTGTCTACTTTTCTTCTTAGGAGTTGTTTTTTACTACATCCGCAACTGCGTTGAATCGCGCATCATCGTCGCAAGAACGAACACAACGGATTGTCCATGTTCATGTTCACAAGGTATCAACAAAGAACTACTCAACACTTTCCCTATCCTTTTTTACTCAACAATCAAGGACATTAAAACAGATAAAGGAACATTGGAATGTGCAGTTTGTTTAACAGATTTCAAAGAACAAGACACTTTAAGATTACTACCTAAATGCAACCATGTTTTTCACCCTCAATGCATTGATTCATGGCTAGCTTCTCATGTTACATGTCCCGTTTGTCGCGCAAATCTTAACCAAGATTCTTGTCAAGTTGCAATGACAATTCCAACCAATTTCAACAATGACCAAACATGTGAAGAAAATTCCGAAACCGTACCCGAAATCACTCTCAATAATGCTTCCCAAGACCAAAACCCGAATCAAATTACCGACGACACGAACAAAGGAGAAAGTATCAATTGTGATGATGGGCATCCATCAAAATTGAAACTTTTGAGATCAAATTCAACTGGTCATTCATTGGTTGAACAAGTGAAGTGTGTGGAGAGGTACACACTGATGTTACCAGAGGATGTTAGAAGGTACATTTTGGTTAACCATAGAAAAAGCTTTCAGCTTTCAAGGAGCAATAACATGGTTAAAGGGTTATGTTGGAGTGATAGTGAAGGGATCAATGGTGATGCAAAAGTAGAGAAATGGGTTTTGTGTGCTAGACATGGTTGA 945 0.3841 MLNFHLKNYYFTSLTTITPFLILLFLNHVESQASMEPVPTDISHHKWNPSFAITAGSVLCLLFFLGVVFYYIRNCVESRIIVARTNTTDCPCSCSQGINKELLNTFPILFYSTIKDIKTDKGTLECAVCLTDFKEQDTLRLLPKCNHVFHPQCIDSWLASHVTCPVCRANLNQDSCQVAMTIPTNFNNDQTCEENSETVPEITLNNASQDQNPNQITDDTNKGESINCDDGHPSKLKLLRSNSTGHSLVEQVKCVERYTLMLPEDVRRYILVNHRKSFQLSRSNNMVKGLCWSDSEGINGDAKVEKWVLCARHG* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2830 314 PANTHER RING FINGER DOMAIN-CONTAINING 216 292 - -
Mal6g2830 314 CDD RING-H2_EL5_like 125 168 - -
Mal6g2830 314 Pfam Ring finger domain 125 168 IPR001841 -
Mal6g2830 314 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Mal6g2830 314 PANTHER RING FINGER DOMAIN-CONTAINING 1 213 - -
Mal6g2830 314 SUPERFAMILY RING/U-box 120 174 - -
Mal6g2830 314 SMART ring_2 126 167 IPR001841 -
Mal6g2830 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 178 IPR013083 -
Mal6g2830 314 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 213 - -
Mal6g2830 314 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 216 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2830 Mal-Chr6 74439414 74440358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2830 13 287 Rapid Response to Elicitors AT3G05200 34.828 1.05e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2830 K10664 - gmx:100782532 299.671