Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2743 ATGGTGCTTACGGTAATATTCACTACTGCTACTTTGATTGTTTTTTTTATTGGTGGTATTATTTCATCCTATGTTGCTTACGCAATCGCTATTAAGCCGGAACCGACTGAAACTAATTACCAGAGTGGCCTCTTTGAGTTTGTCGTTGACAAAATGCTTATACTCTTTTTGGCACTCGTTTTGTTAGTTGTTGCGAAGAATAGAGTTGATAGTGACAACTTTTATGCCATTCAAATCATTCTCAGAATTGTGGTAGTAGCCTGCTTGATTACCATCCTTGTCGGTATAAAGCAAAGGGTCTTACAAATCCCATGTGTGACAGCTGTAGTTTTCTTGGTCGTGTCATGTGCTGTGTCTGTGTTATTGTTGGTTCTGATTTCTACTATTGATGCTGTAATTGTTTTCATTTGTTGGATTGTTCTTATATTCTATCGGATATGGAATGCTAAGGCAAACAGTGATTCATCCGAAATCATACACCGAGATTTGTGTCCCGAGAATATTCTACTAATCAAGAAAGGTGGTTCTTTATGTGCAAAGATTTCTGACTTAGGGAGTAGCAAGTCATCTTTGGGTTCTAATGATTCTGGTTGGAGTGCCCCAGAGGTGATTAGAAATGAAAGACAAACACAAGCTGGAGATATATTTAGTTTAGGCTGTATTATTTTTTACCTCTTGACCAAGGGAAAACATCCCTTTGGAAGCCCTTCAAATCATAAGAAATCTGTTTTGAAATCCAAAAGACTTCTTCATCCTCTCAATTTCTGTCGGGAATGGAAGCATCTTATTACATGGTTATTAAAAGATGTCCCTAACGATAGGCCCAAAGCGGATGAAGTGTTGAAGCATAATTTTTTCTGGGATTCCGATACAAAACTTCAATCTTTATGTGACACAAGTGAGTTCATGCAAGATAGTCGTCACAAAAGAATTAAACTTTTTGGGAAATTTGAGGCTGAGTACAGTTCGGTCCACCTTGCTCCATGGAATAACATTTTGGATGGACGTTTGCTTGCTATCCCTTATGACGGAGGGCATAGTTATGATGTTAGGTCTCTTTCATCTTTGTTGCGGGCTATAAGAAACAATTGTCTTCACTATATGGAATTGCCAGGGGACTTGCAGGCCTTACTGGGAGATAAACCTGAAGGATACTATGAACACTTCCGAAGTTTAAGGACTTCAAATGGCACGGACCCAAACTGCACATTACCGTGA 1218 0.3892 MVLTVIFTTATLIVFFIGGIISSYVAYAIAIKPEPTETNYQSGLFEFVVDKMLILFLALVLLVVAKNRVDSDNFYAIQIILRIVVVACLITILVGIKQRVLQIPCVTAVVFLVVSCAVSVLLLVLISTIDAVIVFICWIVLIFYRIWNAKANSDSSEIIHRDLCPENILLIKKGGSLCAKISDLGSSKSSLGSNDSGWSAPEVIRNERQTQAGDIFSLGCIIFYLLTKGKHPFGSPSNHKKSVLKSKRLLHPLNFCREWKHLITWLLKDVPNDRPKADEVLKHNFFWDSDTKLQSLCDTSEFMQDSRHKRIKLFGKFEAEYSSVHLAPWNNILDGRLLAIPYDGGHSYDVRSLSSLLRAIRNNCLHYMELPGDLQALLGDKPEGYYEHFRSLRTSNGTDPNCTLP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2743 405 Pfam Ribonuclease 2-5A 292 391 IPR010513 GO:0004540|GO:0006397
Mal6g2743 405 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2743 405 Pfam Protein kinase domain 148 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2743 405 SMART serkin_6 51 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2743 405 Gene3D Transferase(Phosphotransferase) domain 1 138 288 - -
Mal6g2743 405 SUPERFAMILY Protein kinase-like (PK-like) 139 304 IPR011009 -
Mal6g2743 405 ProSitePatterns Tyrosine protein kinases specific active-site signature. 158 170 IPR008266 GO:0004672|GO:0006468
Mal6g2743 405 ProSiteProfiles KEN domain profile. 289 405 IPR010513 GO:0004540|GO:0006397
Mal6g2743 405 Gene3D KEN domain 290 392 IPR038357 -
Mal6g2743 405 PANTHER SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1B 157 391 - -
Mal6g2743 405 PANTHER IRE1-RELATED 157 391 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2743 Mal-Chr6 70622344 70626280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2743 158 295 MAP Kinase Kinase Gene Family AT4G26070 34.375 3.14e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mal6g2743 Pkinase 3.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2743 K08852 - ath:AT5G24360 167.933