Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2728 ATGGCTCTTTCAACTGAGATGGAGGAACTTCCCCAACAATTCTCAGAGGGTCTAAGGATTCTTGTGGTTGATCATGAGACCACTGTCCATAATGCCATCCTCGAAATTTCAATTGGATTGAATTACGCAGTTACCACATGCTCTACAGCTTCTTTTGCATTGACTCTTTTGAGGGAAGCAAAGAGTTGTTTTGATGTGATACTAATCGAGGAACACATGTCAGACATGGATTCCTATGATTTTCTCAAAGAAATTACCCAACAAATCAATACTCCTGCAATTATGTTGTGTGGCGTTGTGTCGCCTCCCTGGTTGCTATGGGCGGTTTGGCTTCTGGTCCTCGACTGTTCTCCTGGTGGGGTCCTTCTCTCTGGCTTTCTTGGGTGGGGTATTCCCTCTTTAGTGAGTTAG 411 0.4453 MALSTEMEELPQQFSEGLRILVVDHETTVHNAILEISIGLNYAVTTCSTASFALTLLREAKSCFDVILIEEHMSDMDSYDFLKEITQQINTPAIMLCGVVSPPWLLWAVWLLVLDCSPGGVLLSGFLGWGIPSLVS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2728 136 SUPERFAMILY CheY-like 16 108 IPR011006 -
Mal6g2728 136 Gene3D - 10 108 - -
Mal6g2728 136 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 11 99 - -
Mal6g2728 136 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 99 IPR045279 GO:0009736
Mal6g2728 136 ProSiteProfiles Response regulatory domain profile. 19 136 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2728 Mal-Chr6 69926651 69927660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2728 1 109 Response Regulator Gene Family AT4G31920 33.945 5.34e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g2728 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2728 - K14491 mtr:MTR_6g045327 148.673