Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2712 ATGGGATTCGAGCTAGCAGAAAAAGTACCAAAACCAAAATACAGAAAGGGATTATGGTCACCTGAAGAAGATAACAAGCTTAGTAATTATATCATTAAGCATGGTCATAGCTGCTGGAGCTCTGTCCCCATTAAGGCAGGCTTGCAAAGAAATGGAAAGAGTTGCAGACTAAGGTGGATTAACTACCTGAGACCAGGATTGAAGAGAGGTATGCTCAGCAAACAGGAGGAAGATAAAATCATGACCCTTCACCACATGTTAGGCAACAAGTGGTCTCAAATTGCACAACAATTGCCAGGAAGGACCGACAATGAGATTAAAAATTATTGGCATTCATATTTGAAAAAGAAAGAAGTCAAAAGTAAGGATATTGAATCTCATACTCAAATTCAATATGCTAGCTCAAGCTTAGATACAATGGACTCCTTACTATCAACTCAAAAATATGCAATTCAAGATCCTAATTATGTGTTGTTAGAAAATATTGACAAATCAACAACTACATCATCACATTCTAATCATTCTATTTCACATAATCAAAACATTGCCAATGAAGTTTGTCAAAGCACATTACCAAGACTACTATTTGCTGAGTGGCTCTCAGTGGATCAAGTAAGTGGTGGAAACTCTATAAATTCAGAAAATTCTATGGTCTTGGGAAATGGCTATGATCAAAATTTGACTTTCCAAAAAAATGTTATGCAAATTCCAGGACAGTTTAGTGATGAGTATCATAATAGTTTAATTCCAAATCTAGACACTAAGGTGTACTATTCACAAGATCAAATATCAAATCAAGTGGATGAAAATGAATTGGCCCACTATATGAACAATGATCGAATGTATGTATGA 852 0.3521 MGFELAEKVPKPKYRKGLWSPEEDNKLSNYIIKHGHSCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMLSKQEEDKIMTLHHMLGNKWSQIAQQLPGRTDNEIKNYWHSYLKKKEVKSKDIESHTQIQYASSSLDTMDSLLSTQKYAIQDPNYVLLENIDKSTTTSSHSNHSISHNQNIANEVCQSTLPRLLFAEWLSVDQVSGGNSINSENSMVLGNGYDQNLTFQKNVMQIPGQFSDEYHNSLIPNLDTKVYYSQDQISNQVDENELAHYMNNDRMYV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2712 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mal6g2712 283 CDD SANT 73 114 IPR001005 -
Mal6g2712 283 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Mal6g2712 283 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mal6g2712 283 Pfam Myb-like DNA-binding domain 73 114 IPR001005 -
Mal6g2712 283 PANTHER MYB DOMAIN PROTEIN 55 1 278 - -
Mal6g2712 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mal6g2712 283 PANTHER MYB TRANSCRIPTION FACTOR 1 278 - -
Mal6g2712 283 Gene3D - 72 133 - -
Mal6g2712 283 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mal6g2712 283 CDD SANT 19 63 IPR001005 -
Mal6g2712 283 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mal6g2712 283 Gene3D - 16 68 - -
Mal6g2712 283 SMART sant 15 65 IPR001005 -
Mal6g2712 283 SMART sant 68 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2712 Mal-Chr6 69492304 69497652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2712 10 201 MYB Transcription Factor Family AT5G52260 52.284 1.52e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g2712 Myb_DNA-binding 5.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2712 K09422 - gmx:100803537 368.622