Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2707 ATGGAGAAAGATAACGACTATTCGGCACCACCTATGCCACCAAGTTTAAACACACTTGACTACTCCCTCGATCACCAACAGCAACAATACGAACAGCTTTTGAAGTATAGAGTTGGCGAAACATCCAGTGAAAACAACAACAACGGAATGGTGGATAATTACATGCCTCAAACACAAACTTCAGGAGGCTTTTATGGCTTTGATAAAATGAGTTTTGCAGATGTGATGCAGTTTGCAGATTTTGGACCTAAATTAGCCTTAAACCGCGAAGAAGAATCAGGTATCGAGGACCCGGTTTATAATTTTCTCAAGTTTCCTGTCTTAAACAATAAGATGGAAGACCAAAACTTGATATTGAGTGGTGATGGAGTAGGAGAAAATGATGAGAGGTTCAAATTGACAAGCATGGAACAAGAAGCTCGGGTTTCTGATGAGAACAACAACTCGCTGCAAGAGAAGAATTGTGCAGTAGTGCAAGAGAACAACAAGAAGAGGAAGAGACCAAGAACTGTTAAGACAAGTGAAGAAGTTGAGAGTCAACGCATGACTCACATAGCTGTTGAAAGGAATCGAAGGAAGCAAATGAATGAGCATCTTCGGGTCCTCAGATCCCTCATGCCTGGTTCATACGTGCAAAGGGGTGATCAAGCTTCTATAATTGGGGGGGCTATAGAATTTGTGAGGGAATTGGAACAACTTCTTCAGTGTCTAGAATCACAAAAGAGAAGGAGACTACTAGGAGAGGCACAATCAAAACAAGTTGGGGATTCAGCTCTTGCATCATCAACACAACAACAGCAACCTCCATTTTTTCCAGCTCCTTTGCCAATAAATGACCAGATGAAGCTAGTTGAGATGGAAACTGGACTTCAAGAAGAAATTGCAGAGAGTAAGTCATGTTTGGCTGATGTAGAAGTGAAACTTCTAGGATTTGATGCAATGATTAAAATCCTCTCAAGGAGAAGGCCTGGACAGTTGATCAAGACGATTGCTGCTCTTGAAGATATGCAGCTCATTATCCTTCACACCAACATCACCACTATTGAACAAACAGTTCTTTATTCATTCAATGTCAAGGTGGCTAGTGATACAAGGTTCACGGCTGATGATATAGCAAGCTCCGTTCAGCAGATACTAAGTTTTATTCATGCAAACACTAGCATGTGA 1167 0.4122 MEKDNDYSAPPMPPSLNTLDYSLDHQQQQYEQLLKYRVGETSSENNNNGMVDNYMPQTQTSGGFYGFDKMSFADVMQFADFGPKLALNREEESGIEDPVYNFLKFPVLNNKMEDQNLILSGDGVGENDERFKLTSMEQEARVSDENNNSLQEKNCAVVQENNKKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQSKQVGDSALASSTQQQQPPFFPAPLPINDQMKLVEMETGLQEEIAESKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDMQLIILHTNITTIEQTVLYSFNVKVASDTRFTADDIASSVQQILSFIHANTSM* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2707 388 SMART finulus 185 236 IPR011598 GO:0046983
Mal6g2707 388 CDD ACT_UUR-ACR-like 314 378 - -
Mal6g2707 388 PANTHER TRANSCRIPTION FACTOR FAMA 30 388 - -
Mal6g2707 388 MobiDBLite consensus disorder prediction 160 181 - -
Mal6g2707 388 PANTHER TRANSCRIPTION FACTOR FAMA 30 388 IPR044283 GO:0003700|GO:0010052
Mal6g2707 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 245 IPR036638 GO:0046983
Mal6g2707 388 Pfam Helix-loop-helix DNA-binding domain 180 231 IPR011598 GO:0046983
Mal6g2707 388 CDD bHLH_AtFAMA_like 182 249 - -
Mal6g2707 388 Gene3D - 171 245 IPR036638 GO:0046983
Mal6g2707 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 230 IPR011598 GO:0046983
Mal6g2707 388 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2707 Mal-Chr6 69148588 69150761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2707 38 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 60.050 3.26e-136 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g2707 HLH 8.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2707 - - gmx:100793349 514.227