Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2643 ATGGATATTGGGGCGTTTGAGTTTGATTGGGAAACTACATACCCAAGACCCCAATTTCCCACTTACGAGTTCGAAGAGTTTGAATATTTCGCCCCTGACTTCATCCCAGACCTTGCTGAAATTCTGAAGATAGAAGTATCAGAAGAAAAGAAGAAGGAAGAGGAGAAGATGTTGGAGGTTAAGAAAGAGGCCAAAGTGTTGTTAATGCCATCGGCATTGCTTACTTGCAAGAAAGAAGAGGCGAAAATGGAGGAGGTGAAGAAGGAGGAGGAGGTGTTGTTAATGCAATCAGCATATAGGAAGAAGAGGTCTTTGCAATTTGAGGAAATAAAGAAACATTTTGATGTTCCTCAGGCGATGGCTGCCAAGAATATGAATGTTGGATTGACCCTTTTAAGGAAAAGGTGCAAGGAGCTCAAAATAACCAAGTGGCCTTACAGAAAATTTAAGAGTCTCATGTCACTCATAACCGACTTTAAGGAATTGCGTATGGAAGAGGTGGTTGCTAAGTTGGAGAAGGACAAAAAGATGTTGGAGGAAAATCCTGAGATGGAGTTAAATCATGAACTCGAGAAATTGAGGAAGATTTGTTCGAACTACAAGAGGAGAAGATTAAATTCCCTCCATACTTGA 633 0.4076 MDIGAFEFDWETTYPRPQFPTYEFEEFEYFAPDFIPDLAEILKIEVSEEKKKEEEKMLEVKKEAKVLLMPSALLTCKKEEAKMEEVKKEEEVLLMQSAYRKKRSLQFEEIKKHFDVPQAMAAKNMNVGLTLLRKRCKELKITKWPYRKFKSLMSLITDFKELRMEEVVAKLEKDKKMLEENPEMELNHELEKLRKICSNYKRRRLNSLHT* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2643 210 Pfam RWP-RK domain 105 152 IPR003035 -
Mal6g2643 210 PANTHER PROTEIN RKD1-RELATED 53 207 - -
Mal6g2643 210 Coils Coil 76 96 - -
Mal6g2643 210 Coils Coil 161 181 - -
Mal6g2643 210 Coils Coil 43 64 - -
Mal6g2643 210 Coils Coil 183 203 - -
Mal6g2643 210 ProSiteProfiles RWP-RK domain profile. 88 173 IPR003035 -
Mal6g2643 210 PANTHER PROTEIN RKD4 53 207 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2643 Mal-Chr6 66307466 66308533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2643 105 204 AtRKD Transcription Factor Family AT5G53040 50.980 7.69e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal6g2643 RWP-RK 2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2643 - - aprc:113850801 131.339