Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2627 ATGAGTTATTACAAAAGAGTCGACATGAACAGAAACAATAAGTCCAACATTGTAAAAGGACAATGGACAGTAGAAGAAGACAGGTTGTTGATTAATCTTGTTGAAGAATATGGATTGGGTAAATGGTCTGATATTGCTCAGAAATTGCATGGAAGAATGGGAAAACAGTGCAGAGAGCGATGGCTTAACCATCTAAGGCCTGATATTAAGAAGGACACATGGAGTGAGGAAGAGGAAAAAATATTGATGAAAGCTCATGGAGAGATAGGAAACAAATGGTCAAAGATTGTTAAAATGTTACCTGGAAGAACTGAAAACTCAATTAAAAACCATTGGAATGCAACAAAGAGAAGACAGTATTCCAAAAGAAAGTACCCTAGAGGCAGTAGTACTCTTCTACAAGATTATATCATGAGTTTGAACTTAGACAAAAACCCTCCAAAAGATTATACAGCAAAATCTTCAACTAATGCTAGTGCTATGGAAAACAACATAAGCACAGTACAGGCTCAGTCTCAGAATTCCACTGAATTGTTGGTACCACCAAGTTGTGATTTTGATGATATCAGAAAGCATTTTTGTTTCAATGAGAATTTGTTTCAAGATGAGTGTAGTATTGATTCCTTGCTAGATAATATGGAAATTATGGAAAGAAAAATAGATTGTGAAGTTGAGGAAGAGATGCCACTAGAGATTACGGAAGAATCTATGCTTGGAGTTGAAGTTAAGAAGGAGGTGGATTGGATTGAGATGTTTTTCTCAGGTCAATGA 771 0.358 MSYYKRVDMNRNNKSNIVKGQWTVEEDRLLINLVEEYGLGKWSDIAQKLHGRMGKQCRERWLNHLRPDIKKDTWSEEEEKILMKAHGEIGNKWSKIVKMLPGRTENSIKNHWNATKRRQYSKRKYPRGSSTLLQDYIMSLNLDKNPPKDYTAKSSTNASAMENNISTVQAQSQNSTELLVPPSCDFDDIRKHFCFNENLFQDECSIDSLLDNMEIMERKIDCEVEEEMPLEITEESMLGVEVKKEVDWIEMFFSGQ* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2627 256 Coils Coil 206 226 - -
Mal6g2627 256 CDD SANT 73 116 IPR001005 -
Mal6g2627 256 PANTHER TRANSCRIPTION FACTOR MYB98 11 205 - -
Mal6g2627 256 Gene3D - 18 70 - -
Mal6g2627 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 120 IPR017930 -
Mal6g2627 256 SMART sant 18 67 IPR001005 -
Mal6g2627 256 SMART sant 70 118 IPR001005 -
Mal6g2627 256 PANTHER MYB PROTEIN-RELATED 11 205 - -
Mal6g2627 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Mal6g2627 256 Gene3D - 72 124 - -
Mal6g2627 256 Pfam Myb-like DNA-binding domain 22 80 - -
Mal6g2627 256 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Mal6g2627 256 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Mal6g2627 256 CDD SANT 22 65 IPR001005 -
Mal6g2627 256 ProSiteProfiles Myb-like domain profile. 14 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2627 Mal-Chr6 66002332 66005536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2627 14 213 MYB Transcription Factor Family AT4G18770 56.459 8.85e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g2627 Myb_DNA-bind_6 7.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2627 K09422 - gmx:102662267 292.737