Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2622 ATGAGTGAGAAAGAAAAGTTTGAGGTTGATAGAAATGGGGAGGATCCTATGAGTTATTCTAGTGGTATGCCACCTGATTGGAGATTTGGGAGTGGCAATCTTGCAAATTCATCTGTTGGGTTGGTTTCCACTGGGAATTCTATGAGTATGAATAGAGGGGATTTGATTGGTTCTTCGTCGTGTTCCTCTGCCTCAATGGTGGACTCATTTAGTACTAACTTTTGGGACAATTCGGCGAATTCGCAAAATTTGGGATTTTGTGACATTAATGGAAGCTCTTCAAATACAATTGGAGTTAGAAAAGACGGGTTTGGTTTCGGAAGAGGTGGTCATGATCATGGAGGACTTGAAATTGGTTGGAATCAGGCTAATTCTATGATGAAAGGGGACAGTTTTTTACCGAATGGACAAGGGGCTTTTCCTCAGAGTTTATCTCAGTTTCCAACTGATTCTGGGTTTATTGAAAGGGCTGCGAGATTCTCGTGTTTTGGTGGAGGGAATTTCAGTGATGTGGTGAATGCTTATGGGGTTCCTCAATCCATTGCTATGTATGCCGGTGCAATTCATGGAACTAGGGATGCTCTTGGGGGCATTGGATTCAAAGTAGCTAATGGAGGACAATCACAAGAAAGTGATATTCCTAATGTAGTTGAAGCGGCTACAAAAGGTGTGTCACCATGTGTTGAGCAATTGACTAGTAGAGGAAGCCCTCTTAAGAATGATATAAGTGAGGGTCGGATCGTGTCTCAAGATGAAGGGAAGCAAGCTCTTGTTCGGAATGTTAATGATTCGGACAGAGGTGAGTTGGGTGACGATGATGGTGGTGGTAGTGGTGGACTGGATGGTTCTCCAATGTTGGAGGGTACTACTAGTGGGGAACCTTCTGGTAAAGGACTAAACTCAAAGAAAAGGAAAAGAAGCGGACAGGATGCTGATAATGATGAAGCCAATGGAGCTCGAGAGTTACAATGTGAAGGTGCAAAGGACAGCCCTGAGAATCAACAGAAGGGAGATCAACTACCAACTTCGACAACTAAGGCTTCTGGGAAGAATGCCAAACAGGGCTCTCAAAATTCTGATCCACCTAAGGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAACAGCCATAGCCTTGCAGAGAGGGTGAGGAGGGAAAAGATAAGTGAGAGGATGAAGTTTCTTCAGGAACTTGTGCCTGGATGCAGCAAGGTCACTGGCAAGGCAGTGATGCTGGATGAAATCATCAACTATGTACAGTCACTTCAGCGCCAAGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATATTGAAAGCCTTCTTGCTAAAGATATCCTTCACCAACGGCCTGGTCCTTCATCCAATCTAGGGTTTCCTCAAGAGATGTCAATGAATTTTCCTCCATTACATCCATCTCAACCAGGGATGATTCAGTCACTTATTCCAAACATGACAAACCCATCCGATATCCTTCGAAGAACTATTCATCCGCAGTTAACAGCCTTGAGTGGAGGATTCAAGGAGCCAAATCAGATGCCCGATGTGTGGGAGGATGAGCTTCACAATGTTGTACACATGAGCTTTGCAACAACTGCTCCCACGAGTAGCCAAGACGTTGATGGTTCCGCGACAGCAAATCAGATGAAAGTTGAACTTTGA 1689 0.4429 MSEKEKFEVDRNGEDPMSYSSGMPPDWRFGSGNLANSSVGLVSTGNSMSMNRGDLIGSSSCSSASMVDSFSTNFWDNSANSQNLGFCDINGSSSNTIGVRKDGFGFGRGGHDHGGLEIGWNQANSMMKGDSFLPNGQGAFPQSLSQFPTDSGFIERAARFSCFGGGNFSDVVNAYGVPQSIAMYAGAIHGTRDALGGIGFKVANGGQSQESDIPNVVEAATKGVSPCVEQLTSRGSPLKNDISEGRIVSQDEGKQALVRNVNDSDRGELGDDDGGGSGGLDGSPMLEGTTSGEPSGKGLNSKKRKRSGQDADNDEANGARELQCEGAKDSPENQQKGDQLPTSTTKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIESLLAKDILHQRPGPSSNLGFPQEMSMNFPPLHPSQPGMIQSLIPNMTNPSDILRRTIHPQLTALSGGFKEPNQMPDVWEDELHNVVHMSFATTAPTSSQDVDGSATANQMKVEL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2622 562 MobiDBLite consensus disorder prediction 543 562 - -
Mal6g2622 562 Gene3D - 372 446 IPR036638 GO:0046983
Mal6g2622 562 MobiDBLite consensus disorder prediction 258 272 - -
Mal6g2622 562 SMART finulus 381 431 IPR011598 GO:0046983
Mal6g2622 562 MobiDBLite consensus disorder prediction 298 327 - -
Mal6g2622 562 CDD bHLH_AtBPE_like 365 450 - -
Mal6g2622 562 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 375 425 IPR011598 GO:0046983
Mal6g2622 562 MobiDBLite consensus disorder prediction 1 23 - -
Mal6g2622 562 MobiDBLite consensus disorder prediction 231 363 - -
Mal6g2622 562 Pfam Helix-loop-helix DNA-binding domain 378 426 IPR011598 GO:0046983
Mal6g2622 562 MobiDBLite consensus disorder prediction 328 361 - -
Mal6g2622 562 PANTHER BHLH TRANSCRIPTION FACTOR 11 561 - -
Mal6g2622 562 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 561 IPR024097 GO:0006355
Mal6g2622 562 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 373 444 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2622 Mal-Chr6 65944399 65947205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2622 1 561 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 42.281 5.10e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g2622 HLH 6.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2622 - - lang:109340340 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2622 6 65944399 65947205 Mal6g2622 6 65944399 65947205 ECH