Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2617 ATGAGCTCTTCTTCGTCCCGAAAAATGAATGTGGATGTGCCAAGGTGGCTTCAGGATTTTTTGGAGAAAAAGTTTTTTGACCCATGTCCTGCTCATTCGGATCGAAGGAATGAGTTGACTTTGTACTGTATAAATTGCAAAGAATCTGCTTGTCAGCATGGTGTATCATCAGGATTTCATCAAGGTCACCAGATACTGAAAGTGTATAGATATATGTACAAGGATGTTGTCCGCATGACTGCTATGCAGGCATATATCAACTGCTCCCAAATCCAGCATTTCAAATGCAACAACCGGCTGGTTCTGCATCGTCTCCCACTCTGTGGATCAGCATTGGATGACGCATCAGCATGCAGCTTTGACTGCAAAAAGTCAAATGGAGCTAATTCATATCAGTACTGCTCCATTGCTTGCAAGGCTAAAGCTATGTTAAAAAAGTCTGAATCTGAAGATTCATTTCCTCCTCAGGAATCACGTGAGGAAACTTCTGAGTCGGCCAAGAGAAAAAGGAAACGAAAAGTTACACCACACAGAGCTCATTTCTTCTGA 549 0.4226 MSSSSSRKMNVDVPRWLQDFLEKKFFDPCPAHSDRRNELTLYCINCKESACQHGVSSGFHQGHQILKVYRYMYKDVVRMTAMQAYINCSQIQHFKCNNRLVLHRLPLCGSALDDASACSFDCKKSNGANSYQYCSIACKAKAMLKKSESEDSFPPQESREETSESAKRKRKRKVTPHRAHFF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2617 182 SUPERFAMILY B-box zinc-binding domain 28 70 - -
Mal6g2617 182 Gene3D Classic Zinc Finger 22 87 - -
Mal6g2617 182 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 6 182 - -
Mal6g2617 182 MobiDBLite consensus disorder prediction 148 168 - -
Mal6g2617 182 Pfam PLATZ transcription factor 70 139 IPR006734 -
Mal6g2617 182 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 182 - -
Mal6g2617 182 MobiDBLite consensus disorder prediction 148 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2617 Mal-Chr6 65845740 65847748 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal6g2617 PLATZ 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2617 - - mtr:MTR_5g077740 262.692