Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2616 ATGGAAGCTTCACATGAAACTGAGAGAAACGATCAAAGTTTCAATCTTTTCCAAAAACAATACCAACCCACAATTTCATTCTCCGACGCTTGCAAGAAGCGAAAACGATGGCCGAAGATTTTCCGTCTACAGTCTTTCGCTGATCCTGGCTGTCCAATCGCACCTTCAGGTCCTTTCCGTGAAAACGTTCGGTTCTTTCTTCAAGAAGCTGGTGAACTTGAAGATTATACGGTTATGGGGAATCCTCTTTGGTGCACATTTTTGATTCACGAAAAGACGAATTTGATGGCTCCTTCCTATACAATTGAAGAAGAAGTTTATAACTCTTCTCATCCTTTCTGTGATCATTGCCGTTGTGTAGGTTGGAGTGGACATTTTGTATCAAAGAGAAGGTACCATTTTATAATCCCAATGGATAATGGGTGGCATAAACCCTTAGATGAAGAAGCTCTTGATAATCAGAGTCATCTATTACATGGTGTGATTCATTGCACCAATCATGGATCTATGGGACAGAATTTGCAAATTGCAGTTGAAGATGCTTCAAGGAAAAGGTCAATGGATCTTCGCTTACTTCACGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGGGTTATGGTTTTTGCCGTGGAAGCTTTGGTGTGACAGAAGAAAACTATGATGAAGATATTGAAACTCTTGGTTCATTAGTTCTTGATGATATTGGAGCTTCTAAGATTCATGCTCACTGTCAAGTCTCGTCGACCAGTGTCAAAATGACAGTCTCTTGTTCTTCTTCTAATGCTGCTTCTGCTACTTGTTCTACTTCAGCATTTATGTCAAGAAATTCAACCAAACATGCACTTTCAAGTAGTAGATCAAATTTCACGATGAAGGAAAAATCAGGTAAGTATAAGAAATTCAGCACTGCAGTAGCTAATATGGATAGTAGGTGGCCAACAAGGAGACTAGAGTTTACAGCTCAAGTGATTGTGGAAGCATTAAAAGATGACAAAGCTATGAAACCAGGCTCTAGTGGAATGACAAGACAAGATGTGAGGGATGCAACTAGGCTTCACATTGGTGATACTGGTTTACTTGATTATGTGCTGAAATCACTTGACAATGTGATTGTTGGAAACTATGTGGTTCGACGCATGGTTAACTCTTCATCAAGGATCCTTGAATATACAATTCATGAGCTCGGAAACGGATATTCCGAGTCACCAACATCATCACCATCTTCGGTTCCTAGTAATGATGTTTACAGTGATGTAGTTTATCTTTACAAGAATGTGTTGTTGGGTTATCCAGATTCAGAGGCAGTGGAATTAGCAGTCCAAACAATTCTTGACTTTTTGACATTTATATGCCGTTTGAAACCGAATTTTGTTGAGAATAAGTCTGATTTAAAAGGGCCCACTTGTGGTGAGATTGTAACCGTTCCACTGCATGCAACAGTCAAAGACCTGAAGCAAGCTGCTGAAGCTGCATTAAGGGATACATACTGCATAGCTGAAAGACTCATAGTGACAGATATCAAAGAATTGATGGATGTGGAAGATGAAGAAGTGATTTTTGGACAGGTTGAATCTGGTGTGAAGCTTTGTGTAAGGGGGATTGGTATTGATTTGTATACTCCATTGAAATATCAAGGAGGAACACAAGATGATGATGGTGAGAGAATGGTATCTTGTGATATTTGTGAAGTGTGGCAGCATACAAGATGTTGTGGAATAGATGATTCTGAGACAGTTCCACCTTTGTTTGTTTTTTGTTCTGGATGCTGTTATTCACTTGTGCCACCAAGGATTGAATCTAGCAGCTATGGTATAGTGGATTGTGCTGATCCTTTTCTGGTTTCACCCGAGCCTACTCATTTGTTTGAGTATGCTTATGGATATTGA 1890 0.3979 MEASHETERNDQSFNLFQKQYQPTISFSDACKKRKRWPKIFRLQSFADPGCPIAPSGPFRENVRFFLQEAGELEDYTVMGNPLWCTFLIHEKTNLMAPSYTIEEEVYNSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDNGWHKPLDEEALDNQSHLLHGVIHCTNHGSMGQNLQIAVEDASRKRSMDLRLLHGVAYGHSWFGRWGYGFCRGSFGVTEENYDEDIETLGSLVLDDIGASKIHAHCQVSSTSVKMTVSCSSSNAASATCSTSAFMSRNSTKHALSSSRSNFTMKEKSGKYKKFSTAVANMDSRWPTRRLEFTAQVIVEALKDDKAMKPGSSGMTRQDVRDATRLHIGDTGLLDYVLKSLDNVIVGNYVVRRMVNSSSRILEYTIHELGNGYSESPTSSPSSVPSNDVYSDVVYLYKNVLLGYPDSEAVELAVQTILDFLTFICRLKPNFVENKSDLKGPTCGEIVTVPLHATVKDLKQAAEAALRDTYCIAERLIVTDIKELMDVEDEEVIFGQVESGVKLCVRGIGIDLYTPLKYQGGTQDDDGERMVSCDICEVWQHTRCCGIDDSETVPPLFVFCSGCCYSLVPPRIESSSYGIVDCADPFLVSPEPTHLFEYAYGY* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2616 629 CDD PHD_MMD1_like 548 590 - -
Mal6g2616 629 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 32 597 - -
Mal6g2616 629 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 32 597 - -
Mal6g2616 629 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 543 601 IPR013083 -
Mal6g2616 629 SUPERFAMILY FYVE/PHD zinc finger 550 597 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2616 Mal-Chr6 65840756 65843673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2616 15 596 PHD Transcription Factor Family AT5G22260 28.814 2.90e-75 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2616 - - mtr:MTR_5g077750 978.393