Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2615 ATGATAGAGGAGGAGATGAAGGAAGAGAAAAACATGGATAAACAAATGACGTCGTGTTCGAGATCTTCATTATCTTCACCTTCAGATTCTTCAGATGATGAAAGAGAGTACAAAGTGCAGGATCTTCGAGATAAATTGAAATCATCGCGAGGAAGCATGTTTAATCTGATAGAGAAAGAGTTAGGGTTAAAGATTGGTTGGAGAAAGTTCAGTAGTCAAACTCTTCTTCATGATTTTGTTATAAATCCTCATAACAGGTGGTATCGAGCATGGATCAAATTCATATTGTTATGGGCAGTATACTCATCTTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGCTTGCCAGAGAATCTCTTTATACTGGACATTGTAGGACAAATAGCTTTTCTTGTGGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAGACCTATCACATGGTCTCCAAGCGTACTCCTATTGCTCTGCGGTATCTAAAATCTAGCTTTGTCATTGATCTTCTTGGATGTATGCCCTGGGACCTCATCTACAAGGCTTGTGGACGGAAAGAGGAAGTGAGGTACCTATTGTGGATCCGATTATATAGGGCACAGAGAGTCGTGCAATTTTTCAGGAATTTGGAGAAAGACATACGTGTCAATTACATTATTGCTCGGATTGTGAAACTTTTAGTTGTTGAACTCTACTGCACCCACACAGCGGCCTGCATTTTCTATTATTTGGCTACTACACTACCTGAATCCCAAGAGGGTTACACATGGATAGGAGGTTTGAAACTGGGTGACTACAGTTATTCAAAGTTCAGAGAAATTGATATATGGAAGCGCTACACGACATCGTTGTATTTTGCTATTGTTACGATGGCTACTGTCGGCTATGGAGATATACATGCAGTGAATTTGAGGGAGATGATATTCATAATGATTTATGTTTCATTTGACATGGTTCTTGGTGCTTACTTGATCGGTAACATGACAGCATTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAGGATGGCAGATCTGATGAAATATATGAATAGAAATGAACTTCATAGGGATATCCGTGACCAAATAAAGGGTCATGTGCGCTTGCAGTTTGAAAGCAGCTACACTGACGCTGCTGTCCTTCAGGACATTCCCATTTCTATTCGATCTAAGATATTTCAATCATTGTATTTGCCATACATTCAAAAAGTTTCTCTTTTTAGAGGATGCTCTTCAGAATTCATCAATCAGATTGTTACTAGGCTCCATGAGGAATTCTTTCTTCCTGGGGAAGTTATAATGCAACAAGGATATGTTGTAGATCAACTATATTTTGTCTGCGATGGTATGCTGGAGGAAGTAGGCACAGCTGAAGATGGCTCCGAGGAAACTGTTGCACGTCTAGAGCGCAACAGCTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCACATACTGTTCGTGTTTGTGAACTGTGTAGGGTCTTGCGGATTGATAAACAATCATTTTCAAATATCTTAGATATATACTTTTACGATGGGAAGAAAGTATTAGACAACCTTCTAGAGCGAAAAGAGTCTATTAGATGTAAGCAACTGGAGTCAGACATCACATTTCATATTGGAAAGCTAGAATCTGAACTTGCTTTGAAGGTCAATAGAACAGCTTTTGATGGCGATATGTATCAGCTAAAAAGTTTGATTCGAGCTGGAGCTGATCCCAAGAAGACAGATTATGATGGAAGATCACCTTTGCATCTTGCTGCATGCAGAGGATATGAAGATATCACCCTTCTCCTTATTCATGAAGGTGTAGACATCAACGTCAAAGATAACTTCGGGAACACACCGCTACTTGAAGCAGTTAAGAATGGACACGATCGGATTGCTTCTTTACTTGTTAGGGAAGGGGCCTCTTTGAAGATAGATGATGGTGGTAGTTTTTTATGCACAGCAGTTGCAAGAGGAGATTCAGATTATCTTAAAAGGCTTTTATCTAATGGAATGGATGCTAACTTGAAAGATTATGACTATCGAACCCCTCTACATGTTGCTGCATCTGAAGGTTTAATCTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCTAGTGTTTTTACCAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCTTGGATGAGTGGAAATAAGAATCTGATAAAGCTACTGGAAGATGCAAAATTTGCTCAATTGACAGAATACCCTTTTCCTCAAGAAATTACAGATAAAGTACATCCAAAGAAGTGTACAGTGTTCCCTTTCCACCCGTGGGATCCAAAAGAACAAAGAAGAAATGGAATAGTATTATGGATTCCACACAGCATTCAAGAGCTAATCAAAACAGCTACAGAACAGATAGGATTTTCTAGCAACTCTTGTATTTTATCAGAAGATGCTGGTAAAATTATTGATGTTAGCATGATTAAGGATGAACAAAAGCTCTATTTAGTCAATGAAACACATTAG 2502 0.3897 MIEEEMKEEKNMDKQMTSCSRSSLSSPSDSSDDEREYKVQDLRDKLKSSRGSMFNLIEKELGLKIGWRKFSSQTLLHDFVINPHNRWYRAWIKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIAFLVDIVLQFFVAYRDSQTYHMVSKRTPIALRYLKSSFVIDLLGCMPWDLIYKACGRKEEVRYLLWIRLYRAQRVVQFFRNLEKDIRVNYIIARIVKLLVVELYCTHTAACIFYYLATTLPESQEGYTWIGGLKLGDYSYSKFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMADLMKYMNRNELHRDIRDQIKGHVRLQFESSYTDAAVLQDIPISIRSKIFQSLYLPYIQKVSLFRGCSSEFINQIVTRLHEEFFLPGEVIMQQGYVVDQLYFVCDGMLEEVGTAEDGSEETVARLERNSSFGEISILCNIPQPHTVRVCELCRVLRIDKQSFSNILDIYFYDGKKVLDNLLERKESIRCKQLESDITFHIGKLESELALKVNRTAFDGDMYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHEGVDINVKDNFGNTPLLEAVKNGHDRIASLLVREGASLKIDDGGSFLCTAVARGDSDYLKRLLSNGMDANLKDYDYRTPLHVAASEGLIFMAKLLLEAGASVFTKDRWGNTPLDEAWMSGNKNLIKLLEDAKFAQLTEYPFPQEITDKVHPKKCTVFPFHPWDPKEQRRNGIVLWIPHSIQELIKTATEQIGFSSNSCILSEDAGKIIDVSMIKDEQKLYLVNETH* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2615 833 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Mal6g2615 833 ProSiteProfiles Ankyrin repeat region circular profile. 649 680 - -
Mal6g2615 833 ProSiteProfiles cAMP/cGMP binding motif profile. 409 529 IPR000595 -
Mal6g2615 833 SUPERFAMILY Voltage-gated potassium channels 83 334 - -
Mal6g2615 833 Pfam Ankyrin repeats (3 copies) 655 735 IPR002110 GO:0005515
Mal6g2615 833 Pfam Ankyrin repeats (3 copies) 567 648 IPR002110 GO:0005515
Mal6g2615 833 SUPERFAMILY cAMP-binding domain-like 337 529 IPR018490 -
Mal6g2615 833 MobiDBLite consensus disorder prediction 1 37 - -
Mal6g2615 833 PANTHER POTASSIUM CHANNEL AKT1 31 832 IPR045319 GO:0005249|GO:0006813
Mal6g2615 833 ProSiteProfiles Ankyrin repeat region circular profile. 618 649 - -
Mal6g2615 833 ProSiteProfiles Ankyrin repeat region circular profile. 682 714 - -
Mal6g2615 833 Pfam Ion transport protein 89 334 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal6g2615 833 Pfam Cyclic nucleotide-binding domain 429 513 IPR000595 -
Mal6g2615 833 Gene3D Jelly Rolls 380 542 IPR014710 -
Mal6g2615 833 CDD CAP_ED 409 515 IPR000595 -
Mal6g2615 833 ProSiteProfiles Ankyrin repeat profile. 618 650 IPR002110 GO:0005515
Mal6g2615 833 ProSiteProfiles Ankyrin repeat region circular profile. 585 617 - -
Mal6g2615 833 Gene3D - 91 335 - -
Mal6g2615 833 PRINTS EAG/ELK/ERG potassium channel family signature 233 243 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal6g2615 833 PRINTS EAG/ELK/ERG potassium channel family signature 325 334 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal6g2615 833 PRINTS EAG/ELK/ERG potassium channel family signature 281 298 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal6g2615 833 PRINTS EAG/ELK/ERG potassium channel family signature 124 134 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal6g2615 833 PANTHER POTASSIUM CHANNEL SKOR-LIKE 31 832 - -
Mal6g2615 833 Pfam KHA, dimerisation domain of potassium ion channel 759 828 IPR021789 -
Mal6g2615 833 MobiDBLite consensus disorder prediction 1 15 - -
Mal6g2615 833 ProSiteProfiles KHA domain profile. 760 833 IPR021789 -
Mal6g2615 833 PRINTS Ankyrin repeat signature 698 712 IPR002110 GO:0005515
Mal6g2615 833 PRINTS Ankyrin repeat signature 586 601 IPR002110 GO:0005515
Mal6g2615 833 SMART cnmp_10 409 527 IPR000595 -
Mal6g2615 833 Gene3D - 551 648 IPR036770 -
Mal6g2615 833 ProSiteProfiles Ankyrin repeat profile. 682 714 IPR002110 GO:0005515
Mal6g2615 833 Gene3D - 649 745 IPR036770 -
Mal6g2615 833 SMART ANK_2a 649 678 IPR002110 GO:0005515
Mal6g2615 833 SMART ANK_2a 585 614 IPR002110 GO:0005515
Mal6g2615 833 SMART ANK_2a 618 647 IPR002110 GO:0005515
Mal6g2615 833 SMART ANK_2a 715 745 IPR002110 GO:0005515
Mal6g2615 833 SMART ANK_2a 682 711 IPR002110 GO:0005515
Mal6g2615 833 ProSiteProfiles Ankyrin repeat profile. 649 681 IPR002110 GO:0005515
Mal6g2615 833 SUPERFAMILY Ankyrin repeat 561 737 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2615 Mal-Chr6 65780152 65792180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2615 656 740 Ion Channels AT5G37500 33.945 1.72e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2615 K21867 - gmx:100814385 1389.4