Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2578 ATGTCTCAATCTTCAGCACAAGAGAATAGCAAGAACAGGCCAAAAGCGTGGACATGGTCTGAAAATAAAGCCTTTGAGGATGGGCTTGCAAGATATCCAGAGGACTACATGGAGGGGCGATGGGAGAAAGTGGCAACTCTCGTACCAGGACGATCTCGAGAAGAGGTTGAAGAACACTACCAATTGTTGGTAGATGATATTGCCCTCATTGAGGTTGATCATGTCATGTTGCCACCTTACTCAGATGTCTATGCTTCAGCAAAAACTGACGATTCAACTAATGCAATCAAAGTTGATCCACTTAAGAACACGAAAGGGACTATATAA 327 0.4343 MSQSSAQENSKNRPKAWTWSENKAFEDGLARYPEDYMEGRWEKVATLVPGRSREEVEEHYQLLVDDIALIEVDHVMLPPYSDVYASAKTDDSTNAIKVDPLKNTKGTI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2578 108 SMART sant 13 66 IPR001005 -
Mal6g2578 108 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Mal6g2578 108 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 85 IPR044636 GO:0003700
Mal6g2578 108 SUPERFAMILY Homeodomain-like 17 69 IPR009057 -
Mal6g2578 108 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mal6g2578 108 Gene3D - 8 77 - -
Mal6g2578 108 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 85 - -
Mal6g2578 108 CDD SANT 16 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2578 Mal-Chr6 63875918 63876244 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g2578 Myb_DNA-binding 4.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2578 - - jre:108981184 78.9517