Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2575 ATGTCAACATATAGTGAAGCAACTCTACATCTCGATAATGACAGTGAAGAGGTAGAATTCACCAGTGGTAATGGCTTTGGTAATGATGGAGATACAGGGACAGAGAACTGCAATGGTCATAAATGTTTAAGTGAAATTACAAATGATGATATAAGAGCTATGGAATTTAGCACAGAGGGAGAAGCTATAAAATTTTACACAACGTATGCACGTTTCCATGGGTTTGCCGTAAGGAAGGATGATGTGGTAAAACATGAGGGGAAAATTGTTGCGCGGAGATTACTTTGCAATAAACAGGGAAAGAGTGAAACTAAAAATAAGAAGAATGAGGATAAACATAGGCCAGCTATACGAACTGGTTGCCTTGCTAGACTTAGAGTGGCATATGATTTCATTCGGAAGATTTGGAAAGTTACTAACTTCGTGCCCGATCACAACCATGAACTAAATCCTCCACATTTGGTTCATTTGATTCCAAATTATCAGAAATTGAGTGAAGTGGATAAACATATTGTCAGTGGATTGCATTCTCAAGGTGTAAGAACTTGCGATATACTAGGTTATTTGATGGGTCAAAAAGGAGGGTATGAAAATCTTGGATTTATCAAAAAGGACCTATATAATTACACTGATCGGACAGCAAGGGCTAGAATTGAAGACGGGGATACTTTTTCTACTTTGAGTTATTTTCAAGGTAAAGCTGATAGCGATGCTACTTTTTTTTTTTTTTCAGAATTTACCTTTACAGATGATGGATGGTTGGAAAATATTTTTTGGGCAGATTCTGCCAGCAGGTTTGATTTTGAATGTTTTGGCGACGTGGTTGCCTTTGACACCACTTATAAAAAGAATAGGTATGGCAAGCCACTTGTAATTTTTTCAGGATTCAACCACCATGGAGAAACTACCATTTTTGCATGTGCTTTGATTTGCAATGAAAAAACAGAGACATATAAGTGGGTTTTAAATATGTTTTCAAAGGCCATGTACGACAAACATCCAAAAGCGGTTGTTACTGATGGAGATAAATCAATGAGGGAAGCTATTAAAGTTGTATTTCCAAATTCAAAGCATTGCCTTTGTTCGTGGCATCTTCATCAAAATGCTAAAGTGCATATAAAAGACCCCAGATTCTTAGCAGAGTTTACGAGACTCATGTATTCTAATTACACACCTGAAAGGTTTGAATCTGGCTGGAAGACGGTTGTTGATAGTTATGGTGTATCAAATACTAAGTGGGTGATTAAAACATATGAATTGAAGCGAATGTGGGCAAGTGCATACATGCGAGACCATTTCGTGTGTGGAGTTAGAACAACATCGATATGCGAAGGTGTGAATTCATTTATCAAGAAGTATGTTCAAAACAAAAATAGCCTTGTTGATTTCTTGAACAATTTTGAAAGAGTTGTCAAAGATTACAGACATAATGAATTATTGGCTGATTTCAAATCATTTTATTATAAACCTGTGTTGACAACATCCTTGCCTGTATTTGAGCTTGGAGCATCAAAAATATTCACTTTAAAAAGTTCAAAGAAGTCAAAAAGGCGATAG 1557 0.3622 MSTYSEATLHLDNDSEEVEFTSGNGFGNDGDTGTENCNGHKCLSEITNDDIRAMEFSTEGEAIKFYTTYARFHGFAVRKDDVVKHEGKIVARRLLCNKQGKSETKNKKNEDKHRPAIRTGCLARLRVAYDFIRKIWKVTNFVPDHNHELNPPHLVHLIPNYQKLSEVDKHIVSGLHSQGVRTCDILGYLMGQKGGYENLGFIKKDLYNYTDRTARARIEDGDTFSTLSYFQGKADSDATFFFFSEFTFTDDGWLENIFWADSASRFDFECFGDVVAFDTTYKKNRYGKPLVIFSGFNHHGETTIFACALICNEKTETYKWVLNMFSKAMYDKHPKAVVTDGDKSMREAIKVVFPNSKHCLCSWHLHQNAKVHIKDPRFLAEFTRLMYSNYTPERFESGWKTVVDSYGVSNTKWVIKTYELKRMWASAYMRDHFVCGVRTTSICEGVNSFIKKYVQNKNSLVDFLNNFERVVKDYRHNELLADFKSFYYKPVLTTSLPVFELGASKIFTLKSSKKSKRR* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2575 518 MobiDBLite consensus disorder prediction 1 32 - -
Mal6g2575 518 Pfam MULE transposase domain 274 368 IPR018289 -
Mal6g2575 518 Pfam FAR1 DNA-binding domain 64 151 IPR004330 -
Mal6g2575 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 510 IPR031052 GO:0006355
Mal6g2575 518 MobiDBLite consensus disorder prediction 18 32 - -
Mal6g2575 518 PANTHER OS02G0262500 PROTEIN 50 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2575 Mal-Chr6 63753208 63754764 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g2575 MULE 8.7e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2575 - - ccaj:109792835 502.286