Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2566 ATGGAAACTACAAGGCGCTGGTTTAGAAAGTGTAGGTTTAAAAAAAAGGAAGCTATGCCTACAAGAACGTCAAATGATCTTCAGTGTTTGGCACCGGACGTAGTAAATGAAGAACCGCCTTCAAATGAAACCAAATTGAAGGTTGAAGCTGCAAAGCATTTCGTAGAAAGTTTTTATAAGAACCATAAGAAGAGCCAGCAAGAAAGAAAAGAAAGACGTAATATGCTAGAAAAGAATTTGGCTGATGCCGAAGTAACTAAGGAGGAGAAGAAAAATTTGCTTAAGCATTTCGAGGAAAAAGAGACAGAAATCATGCGCCGTCAAAGACTTAAGATGGGTGCTTATGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCGTTTGGAGAGGTTAGAATCTGTCGAGAGAAGGCAACTGGTCAGGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTAGTAGAGGACAGGTTGAACATGTCAAAGCTGAGAGGAACCTTCTTGCTGAAGTTGATAGCAATTTCATTGTAAAACTTTACTGTTCCTTTCAAGATGAGGAATATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAAGATATATTGACTGAAGATGAAGCTAGGTTCTATATTGGGGAGACTGTGCTAGCCATAGAGTCAATTCATAGACATAATTATATTCACAGAGATATCAAGCCTGACAACTTGCTGCTGGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTGAGGAAAAAGACTTATCTGTTGAAATTAACAGAAGTGGAGTCCTTCAAAGTGATGGACGTCCTTTAGCTCCTAACCAATCAGAACAGCAGCAACTGGAGCATTGGCGGAAAAATCGCAGCAGAATGCTGGCCTATACTAAGGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGTTGAAGAGAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGTCATAATGTATGAAATGTTGGTGGGCTATCCACCATTTCATTCAGACAAACTAAAGGCTACATGTATAAAGATAGTAAATTGGAAAATTTATTTAAAATTTCCAGAAGAAGCTAAACTATCATCAGAGGCAAAGGATCTTATCCGTAGTCTCCTATGTAATGTGGAGCAGAGGCTTGGAACTAAAGGGTCTGATGAAGTAAAGGCTCATGCATGGTTCAAAGGTGTTGAATGGGACAAATTTTACCAAATGAAAGCTCCTTTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAATTTGAAGAGGCGGACCAGCAAACTGAACCTTCATCAGAGGCAGGCCCATGGAGAAAGATGCTTCCATCTAAAGATATTAATTTTGTTGGTTACACATACAAGAATTATGAAATGGTGGATGAAAATGTAATACCTGGATTTGCTGAACTGAAGAAGAAGACAAAACCTAAAAGGCCATCTATTAAGTCCTTATTTGAGGATGAATCAGCCAAGACTTCTTCAAATCAACCTGCTAAAGGGAGCGTCTTAAATCTCTTGCCTCCTCAGATTGAAGCACCACTCTCCATTTCACCTTCCACCTACAATAACACCAACAGCTTAATCTCGGTCGCCTTCGTCGCAGAACTGCTGAGTCGCGGCGGTCGAATTTTCTGCGAAATTAACCCCTCTGGTGGTGGCGATCAACTTCAGTGTAATTTTGACAGATCCTCTTTGAGCTCTTTATTGAAATGGGTGCCTAGGATGTGCAGCTCTCAAATCCGGGATATTTTGGTTTCAGCTGTGGCTCACGCCATTCATGTCATTTGGCTTTTCCGTAATGCTATTAGATTTGGATCGGGTAATATTTCTCTTCATGGGGCAAAGGCCAAGATTATTTCTTCCGTTGCTATGTCAGGTAATGTGTTGTCTGGTAAGTGCCTACCTTCCGATAATAAGTTGCTGGATACCTTCATGATTTCGCCGCATAATAGAAATGTTGCTTCTATAGTTACTGTTGTTTGTAAAGCCCCCACCTTGCCTTTTGTAAAGGTTAACACATATGGTTCAGTTGTCGCGAATTGA 2124 0.403 METTRRWFRKCRFKKKEAMPTRTSNDLQCLAPDVVNEEPPSNETKLKVEAAKHFVESFYKNHKKSQQERKERRNMLEKNLADAEVTKEEKKNLLKHFEEKETEIMRRQRLKMGAYDFEPLTMIGKGAFGEVRICREKATGQVYAMKKLKKSEMLSRGQVEHVKAERNLLAEVDSNFIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYIGETVLAIESIHRHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLEEKDLSVEINRSGVLQSDGRPLAPNQSEQQQLEHWRKNRSRMLAYTKVGTPDYIAPEVLLKRGYGVECDWWSLGVIMYEMLVGYPPFHSDKLKATCIKIVNWKIYLKFPEEAKLSSEAKDLIRSLLCNVEQRLGTKGSDEVKAHAWFKGVEWDKFYQMKAPFIPEVNDELDTQNFEKFEEADQQTEPSSEAGPWRKMLPSKDINFVGYTYKNYEMVDENVIPGFAELKKKTKPKRPSIKSLFEDESAKTSSNQPAKGSVLNLLPPQIEAPLSISPSTYNNTNSLISVAFVAELLSRGGRIFCEINPSGGGDQLQCNFDRSSLSSLLKWVPRMCSSQIRDILVSAVAHAIHVIWLFRNAIRFGSGNISLHGAKAKIISSVAMSGNVLSGKCLPSDNKLLDTFMISPHNRNVASIVTVVCKAPTLPFVKVNTYGSVVAN* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2566 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mal6g2566 707 MobiDBLite consensus disorder prediction 513 529 - -
Mal6g2566 707 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal6g2566 707 Gene3D Transferase(Phosphotransferase) domain 1 203 434 - -
Mal6g2566 707 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 519 - -
Mal6g2566 707 CDD STKc_NDR_like 116 481 - -
Mal6g2566 707 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mal6g2566 707 Pfam Protein kinase domain 119 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2566 707 Coils Coil 73 103 - -
Mal6g2566 707 SMART serkin_6 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2566 707 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Mal6g2566 707 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 519 - -
Mal6g2566 707 ProSiteProfiles Protein kinase domain profile. 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2566 707 SUPERFAMILY Protein kinase-like (PK-like) 99 464 IPR011009 -
Mal6g2566 707 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal6g2566 707 MobiDBLite consensus disorder prediction 505 529 - -
Mal6g2566 707 Gene3D Phosphorylase Kinase; domain 1 108 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2566 Mal-Chr6 63257744 63306733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2566 37 540 AGC Kinase Gene Family AT4G14350 76.634 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mal6g2566 Pkinase 8.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2566 K08790 - gmx:100795087 855.514