Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2554 ATGTCTCAACCATCGGAACAAGAGAATAACAAGACCATGCCAAAAGCATGGACGTGGTCTGAAAATAAAGCCTTTGAGGATGGGCTTGCAAGGTATCCAGAGGACTACATGGAGGGGAGATGGGAGAAAGTGGCAGCTCTCGTCCCAGGACGATCTCCAGCAGAGGTTGAAGAACACTACCAATTGTTGGTACAAGATATTGCCAACATTGAAGCTGGTCTTGTCTCGTTGCCATGTTACTCAGATGTCAATGCTTCAACAAAAAAATGA 270 0.4556 MSQPSEQENNKTMPKAWTWSENKAFEDGLARYPEDYMEGRWEKVAALVPGRSPAEVEEHYQLLVQDIANIEAGLVSLPCYSDVNASTKK* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2554 89 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Mal6g2554 89 Gene3D - 9 77 - -
Mal6g2554 89 SUPERFAMILY Homeodomain-like 17 70 IPR009057 -
Mal6g2554 89 SMART sant 13 66 IPR001005 -
Mal6g2554 89 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mal6g2554 89 CDD SANT 16 64 IPR001005 -
Mal6g2554 89 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 85 IPR043363 -
Mal6g2554 89 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 12 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2554 Mal-Chr6 62519348 62519617 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g2554 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2554 - - fve:101308279 83.9593