Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2535 ATGGAGTATCAAAGTGGAGGAAGTAGTTCTTCTAATTCTCAGAGTAAGAAGAAACGTGTTCGCCGTCCTCACACTTCTAATCAGATTCAAAGGCTTGAAGAAATGTATATGGAGTGCCCACATCCTGATGAAAAACAAAAGTGGGAGTTAAGCAAAGAATTAGCATTGAGTCATAGTCAGATCAGATTTTGGTTTCAAAACAAAAGGACTCAAATGAAGGCAAAACATGAAAGAACTGATAACAGCTTACTAAGGGCCGAGAATGATAAGATAAGATGTGAGAATATAGCTATGAAGGAAGCCCTAGAAAATTTAATCTGCACCTCTTGTGGTTGTTCTCCAATCAATGATGATTGTTATTTTGATGAAGAAAAGTTGAGATCTGAAAATGCTCAACTCAAAGAAGAGTTACCACAACAATCATGGACTCCAAGTTATGGAAATATGCATGTCAATACCTATGGCAATGCAATATCTCATGCACAATATTCTGGAAAAAATTCGGCAATTATGCCCCCACATTGTGATTCAAATGCTCAAAATCAAACTCTCTCGGGTATTAATATCGATTCATCTAATCTTCTACTCCCCACCATTTCTCCGGATTACACCAATTCATCGGCTGATACTGGTGCTTCGACAATGCAATTAGGGTTTTCTGGATTCCAGGGTTCTGACTGTCCGTCGGAGTCATTCTTGAATAGCATTTGGAATAATGAAACACTTGCACTAGGTTCAGGACAAAGGCTTAACAACACTGGTGAATCTCACCACATTGTTTCTCAACAGCCACCATCAATTGGCTCACTTGAATACTGA 819 0.3871 MEYQSGGSSSSNSQSKKKRVRRPHTSNQIQRLEEMYMECPHPDEKQKWELSKELALSHSQIRFWFQNKRTQMKAKHERTDNSLLRAENDKIRCENIAMKEALENLICTSCGCSPINDDCYFDEEKLRSENAQLKEELPQQSWTPSYGNMHVNTYGNAISHAQYSGKNSAIMPPHCDSNAQNQTLSGINIDSSNLLLPTISPDYTNSSADTGASTMQLGFSGFQGSDCPSESFLNSIWNNETLALGSGQRLNNTGESHHIVSQQPPSIGSLEY* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2535 272 MobiDBLite consensus disorder prediction 248 272 - -
Mal6g2535 272 SUPERFAMILY Homeodomain-like 10 79 IPR009057 -
Mal6g2535 272 SMART HOX_1 17 79 IPR001356 GO:0003677
Mal6g2535 272 ProSitePatterns 'Homeobox' domain signature. 50 73 IPR017970 GO:0000981|GO:0006355
Mal6g2535 272 CDD homeodomain 19 76 IPR001356 GO:0003677
Mal6g2535 272 Pfam Homeodomain 18 73 IPR001356 GO:0003677
Mal6g2535 272 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 7 140 IPR042160 -
Mal6g2535 272 MobiDBLite consensus disorder prediction 1 26 - -
Mal6g2535 272 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Mal6g2535 272 Gene3D - 4 90 - -
Mal6g2535 272 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 7 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2535 Mal-Chr6 61803264 61805749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2535 16 141 Homeobox Transcription Factor Family AT1G73360 65.079 4.29e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal6g2535 Homeodomain 4.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2535 K09338 - gmx:100785023 196.823