Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2533 ATGACGATGATGAAATTGATGCCGGGATTTCGATTCCGTCCAACTGGAGTTGAATTGATCAATTACTTTCTGAAAAGGAAAGTGACGGGTAAAATGTTTCAAAATAATTTAATTTCTGAACTTGACATTTACAAATATGCTCCTTGGGATCTCCCAGATAAATCTTATTTGAAAACTGGTGATTTGGAATGGTACTTCTTCTGCCCTGTAGAGAAGAAGTATGGAAACGGGGTTAGGTTGAATCGAGCTACCGAAATTGGGTATTGGAAATCTACTGGTAAGGATAGAGCTGTTCAACACAAAAATCAAACTGTTGGTATGATTAAAACCCTTATATTTCACACTGGAAAAGTGCCTCGTGGGGATCGAACGGATTGGGTTTTGCATGAATATAGGCTTGAAGATAAGGAACTGGCTTATAAAGGAATTGCTCAGAATTCCTATGTAGTTTGTAAGGTGTTTCAAAAGGAAGGTCGTGGTCCGAAGAATGGCGCTGGATATAATGGTTCAATATCCATGTCATGTGATCAATCAGCACAGATTCCTTCTCCCGACGACGCAGCAAATTCATGTCAAATAGGATTGATGCCTTCTCCGGACGACCCTGCAAATCATTCATATCCAGAAAATCAAGCTGTGAATGATGATATTTTATCAATGCTTGAAGGTAACTTTTTTGAGGGTTTGGGAGACCTGGAGGCTGAGTTTAGCATGAATGGAATGGCTACTATGAATGATGTTGTGGGGAGTGGCGACTTAAATTTTGTTGAGCTGATCGATCTAGACTCTGAGTTGTTCTGGCAGGCTACTACCCAACCTGAAAGTTGGAGTTGA 834 0.4029 MTMMKLMPGFRFRPTGVELINYFLKRKVTGKMFQNNLISELDIYKYAPWDLPDKSYLKTGDLEWYFFCPVEKKYGNGVRLNRATEIGYWKSTGKDRAVQHKNQTVGMIKTLIFHTGKVPRGDRTDWVLHEYRLEDKELAYKGIAQNSYVVCKVFQKEGRGPKNGAGYNGSISMSCDQSAQIPSPDDAANSCQIGLMPSPDDPANHSYPENQAVNDDILSMLEGNFFEGLGDLEAEFSMNGMATMNDVVGSGDLNFVELIDLDSELFWQATTQPESWS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2533 277 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mal6g2533 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 165 - -
Mal6g2533 277 PANTHER PLANT NAC DOMAIN PROTEIN 166 206 - -
Mal6g2533 277 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Mal6g2533 277 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Mal6g2533 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 166 206 - -
Mal6g2533 277 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Mal6g2533 277 PANTHER PLANT NAC DOMAIN PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2533 Mal-Chr6 61674501 61675436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2533 1 167 NAC Transcription Factor Family AT5G64060 61.677 2.80e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g2533 NAM 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2533 - - gmx:100778933 299.671