Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2532 ATGATGAAATTGATGCCGGGATTTCGATTCCGTCCCACTGGAGTTGAATTGATTAATTACTTTCTGAAAAGGAAAGTGATGGGTAAAAGGTTTCAAAATAATTTAATTTCTGAACTTGACATTTACAAATATGCTCCTTGGGATCTCCCAGATAAATCTTATTTGAAAACTGGTGATTTGGAATGGTACTTCTTCTGCCCTGTAGAGAAGAAGTATGGAAACGGGGTTAGGTTGAATCGAGCTACCGAAATTGGGTATTGGAAATCTACTGGTAAGGATAGAGCTGTTCAACACAAAAATCAAACTGTTGGTATGATTAAAACCCTTATATTTCACACTGGAAAAGCGCCTCGTGGGGATCGAACGGATTGGGTTATGCATGAATATAGGCTTGAAGATAAGGACCTGGCTGATAAAGGAATTGCTCAGAATTCCTATGTAGTTTGTAAGGTGTTTCAAAAGGAAGGTCGTGGTCCGAAGAATGGCGCGCAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGATGAAGTGGCAATACCTTTTGCTGATTCTGTTCCAAATGACCAGAATTTCCATGGTAGTGGATATAATGGTTCAATATCCTTGTCATGTGATCAATCAGTAAATCCATGTCAAATAGGATTGATGCCTTCTCCGGACGACCCTGCAAGTCATTCATGTCCAGAAAATCAAGCTGTGAATAGTAATAACGATGATGATATTTTATCAATGCTTGAAGGTAACTTTTTTGAGGGTTTGGGAGACCTGGAGGCTGAGTTTAGCATGAACAGAATGACTGCTATGGATGATGCTGTGGGGAGTGGCGACTTAAATTTTGTGGAGTTGATTGATCTAGACTCTGAGTTGTTCTGGCAGACTACTACCCAACCTGAAAGTTGGAGTTGA 915 0.4011 MMKLMPGFRFRPTGVELINYFLKRKVMGKRFQNNLISELDIYKYAPWDLPDKSYLKTGDLEWYFFCPVEKKYGNGVRLNRATEIGYWKSTGKDRAVQHKNQTVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLADKGIAQNSYVVCKVFQKEGRGPKNGAQYGRPFNEEDWSDDDEVAIPFADSVPNDQNFHGSGYNGSISLSCDQSVNPCQIGLMPSPDDPASHSCPENQAVNSNNDDDILSMLEGNFFEGLGDLEAEFSMNRMTAMDDAVGSGDLNFVELIDLDSELFWQTTTQPESWS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2532 304 Pfam No apical meristem (NAM) protein 6 131 IPR003441 GO:0003677|GO:0006355
Mal6g2532 304 Gene3D NAC domain 13 157 IPR036093 GO:0003677|GO:0006355
Mal6g2532 304 PANTHER PLANT NAC DOMAIN PROTEIN 3 225 - -
Mal6g2532 304 SUPERFAMILY NAC domain 2 154 IPR036093 GO:0003677|GO:0006355
Mal6g2532 304 ProSiteProfiles NAC domain profile. 4 154 IPR003441 GO:0003677|GO:0006355
Mal6g2532 304 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2532 Mal-Chr6 61658759 61659673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2532 3 299 NAC Transcription Factor Family AT5G09330 43.714 3.29e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g2532 NAM 7.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2532 - - mtr:MTR_8g093580 360.147