Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2527 ATGAAAACATATTTTTTTTGTATTTTTTATGAAAAACGAGGGACAAAATTAGGGTGCTACAAAATCGATGAAGACCAAAAGCTTTGTGTCCTTGGTGATCCTTTGGACGAAGAATTTAAGGGCTATGTTTTCAAAACCACTAATGGGTGTGACAAACAAGGATTCCCAATGAAGAAGGCAGAACTACTTTTTTTCCATGGATATGGAAGGCACAATAAAAAACGTAGAAGGAAGTCTGATTGTGGATGCATCATCAACCCCGATCTCTCTATTTTGAACTTGTTAATTGTGCAGAAAGGTGAAAAAGGTTTACCATGTCTTATTGATGTTGCGAATCCAAGGACGAGAGGACCAAAAAGAGCATCCAAAATCTACGAGTTGTTTAACTTGTCAAAGGATAATGATGTGCAAAAATATGTTAAAACCCACCGTCAAATTTTCACAACCAAAAAACTCCTTGCATTCATATTAAAAGGAGCGAGGGAATCCCGAAGTGAGAGTTTGGCGAAGAAGAGATCGAGATTATCAAGTGCTACAAAGCCATCTCTCACGGTATAA 558 0.3746 MKTYFFCIFYEKRGTKLGCYKIDEDQKLCVLGDPLDEEFKGYVFKTTNGCDKQGFPMKKAELLFFHGYGRHNKKRRRKSDCGCIINPDLSILNLLIVQKGEKGLPCLIDVANPRTRGPKRASKIYELFNLSKDNDVQKYVKTHRQIFTTKKLLAFILKGARESRSESLAKKRSRLSSATKPSLTV* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2527 185 SMART Ribosomal_S6e_2 15 109 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal6g2527 185 PANTHER 40S RIBOSOMAL PROTEIN S6 29 150 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal6g2527 185 PANTHER 40S RIBOSOMAL PROTEIN S6 150 183 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal6g2527 185 Pfam Ribosomal protein S6e 29 108 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal6g2527 185 Gene3D - 114 182 - -
Mal6g2527 185 PANTHER 40S RIBOSOMAL PROTEIN S6 29 150 - -
Mal6g2527 185 PANTHER 40S RIBOSOMAL PROTEIN S6 150 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2527 Mal-Chr6 61372064 61373417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2527 65 185 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 47.305 1.28e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2527 K02991 - gmx:100786559 185.652