Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2520 ATGAAAGGGTCTGCCTCAACAGATGAATTTGTGACTGCAGTGACTGAGGAAGGAATCGATGAAGTCATTGCCAGCCGTCTTGTATCCTGGCAGAAGATCCCCCAAAAAGCAAGCAGCATCTCTTTCCTCGTTATGAGATTTCAGGGTACTAAAGTGTGTGATTCTGAAAGTCTTTTGGATATTGATTTGGAGGACAATATCAAATTTCTTCTATGTGATTTTCGCCAATTACCTAAGACATACAAATATGATAGGATTACATGTTGGGAAAAGCTCATATTGGGATGGAAGAAATCTGATTGTTATGATATTGAGGATCATAATAATGTTGTCCCAACAAGACGACACTCATATAATGTGTCTCCCGCAGTTGCCGCGGGGCTTGGCGATTACCCTGCCACAGATTCAAGAAAGGATAGCACTATTCTTGTCACGCCCCATTTGGGTATGGCAAAAGCTCTTGGTTCAATTGGAAAAACAACAAAAGCAATAAAGATATATCAACATGTAATCACTCTTTTGAAATCAGATAAAGGTGCTGAAAATTGCTCAATGTCTAGGGAATTTGGCTTTATCAAGGACCTGAAAAAGGACTTAGACATTGTAAATTATAAAGAGTTTGATGAAGTAGATGGAATAGAAGTTGCTTGGAATCAAATTAGTATAGAGGATGTTATGCAATCACCCCAGAATTTGGAGAAGTTGTATTCTGAGGTTCACCTTCTCAAGTCACTGAAACACGAAAATATCATTAAGATGTATAGCTGTTGGGTGGACGAAAAGAGCAGCAATATCAACATGATAACTGAATTGTTCACCTCTGGAAGTTTGAGGCAGTATCGTAAGAAACATAAGAATGTGGATATGAAGCCTATCAAGAACTGGGCGAGGCAGATTCTTCATGGCTTGTGCTTTCTGCACAATTACAGTCCTCTTGTTATTCACAGGGATCTGAAATGTGATAATATTTTCGTTAACGGGAACAATGGACAAGTTAAGATTGGAGATCTAGGATTGGCAATTGTCATGCAGCAATCTACTGCCCGGAGTGTTATTGGTACTCCAGAATTCATGGCCCCAGAGCTTTATGAGGAAGAATACAATGAACTTAATGAGTCCAGCTTTATGAGGAAGAATACAATGAACTTAATGAGTCCACATGCCACAATGAGTTAA 1176 0.3912 MKGSASTDEFVTAVTEEGIDEVIASRLVSWQKIPQKASSISFLVMRFQGTKVCDSESLLDIDLEDNIKFLLCDFRQLPKTYKYDRITCWEKLILGWKKSDCYDIEDHNNVVPTRRHSYNVSPAVAAGLGDYPATDSRKDSTILVTPHLGMAKALGSIGKTTKAIKIYQHVITLLKSDKGAENCSMSREFGFIKDLKKDLDIVNYKEFDEVDGIEVAWNQISIEDVMQSPQNLEKLYSEVHLLKSLKHENIIKMYSCWVDEKSSNINMITELFTSGSLRQYRKKHKNVDMKPIKNWARQILHGLCFLHNYSPLVIHRDLKCDNIFVNGNNGQVKIGDLGLAIVMQQSTARSVIGTPEFMAPELYEEEYNELNESSFMRKNTMNLMSPHATMS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2520 391 Gene3D Transferase(Phosphotransferase) domain 1 272 374 - -
Mal6g2520 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK8-RELATED 204 370 - -
Mal6g2520 391 Gene3D Phosphorylase Kinase; domain 1 183 270 - -
Mal6g2520 391 Pfam Protein kinase domain 210 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2520 391 SMART serkin_6 199 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2520 391 SUPERFAMILY Protein kinase-like (PK-like) 204 366 IPR011009 -
Mal6g2520 391 ProSiteProfiles Protein kinase domain profile. 146 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g2520 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Mal6g2520 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 204 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2520 Mal-Chr6 60976499 60982989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2520 204 360 MAP Kinase Kinase Kinase AT5G41990 79.618 4.04e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mal6g2520 Pkinase 1.6e-35 CL0016