Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2517 ATGAAGACAAAATTAGGCAGAAAGAGTAATGTAGAGATGAAGAAGGCCTTAAGGAGAATGTTAGAGAAGGAAGAAGAAACTGGTGAAGATCCTTCTTCTTTTTTTGTTAATAAGAGTAAAGTTGTTGGCAAGGAAGTGAAGAAGAAGAAGAGGGAAAATCGTGGTAGGAAAAGAAAGATAATTTCTGATGAAAATAATGCTTTGAAAGAGAAGAAGAAGGATAATTGTGGTAGGAAAAGAAAGATAATTTTTAATTCTGAAGATATAAAAGAGAAGAAAAATGGTGGTTTTGTAAAGAAAGAGAAGAAGGAACCTTATAGAAAAAGAAAAAAGCTTATATATGGTAATTTTAATAAAGGAGGTTATGCTTTAAGGAGTGCTGGAAAAATGAAATTTGATTGCATGCATAAGGAAACTAAGAACAAGGAAGAAACTAACATTAATGATCATGATGTTAAGCTATCCAAGTATATGCTGGAACACCTTCTTCCATATTTAAGACAATTGGATCTAGAACAAATGGCTGAGAAGGAGATAGAAGCCAAGATACAGGGGCTCAAACGCTCCGAGCTAAAAATAGAAGTAGCGGATTGCTCTAAAGATGAGTATGCGTACTGTGACAATTGCCAAACCTCAATATTTGACTACCACAGAAGTTGTACAAAATGCTCTTTTGACCTTTGTCTCCGCTGTTGCTATGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTGCAGATCCAAATGAGTTTGAGTTTATCAACCGAGGACAAGATTATATGCATGGTGAAAATGAAGAGAGAAGAATAATCAGAGAGAATGAATCTTGTGCTGCCGCCCAGTCTCGTGGATGGTCAAAATCTGGGTGGCATGCAGGCAGCAACGGTAGCATTCCCTGTCCAAAAGCCAAAAATGAAGGTGATCATGGTTTCCTTGAACTGAGACGCATGTTTCCGCCAAATTGCATCTCTGAGTTAGTATGTAAAGCAAATCAAATTAAAGAAACAGTTAAACTTGAAGATGAAGAGGAGACTCTTGATAATGGTTGTTCTTGTTTGAAGCCTGTTAAGAAGGAAGGTGATATACGGGATAATACAGGGAAGGCAGCTTTTCATAAAGATTCTGGTGAAAACTTTTTATACTGTCCTAGGGCTATAGATCTACATAATCATGAGAATGATTTAAGACATTTTCAATGGCATTGGAGAAAAGGGGAGCCTGTAATTGTCAGCAACGTACTTGAATCATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGTGTGCATTTCATCAGATAAGCGATACCAATCACAGTTCACTTTTGGATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGGAGATATTAAAGTGCATGATTTCTTTACTGGGTACACAAATGGTCGCAAGGATAAGCTTGATTGGCCTCAGCTATTGAAATTGAATGATCAGCCTCCTAATTTATTCGAGAAAAATTTGCCTCACCATTGTGCTGAGTTGATATCCTCCTTGCCGTATAAAGAATATACAGATCCTTTCAAAGGTTCTCTTAACCTTACTGTGAAGCTGCCTGATAATGTTTACATGGGACCAAAAACATATATTGCTTATGGATTTGATCAGGAGCTTGGGTGGGGTGATTCTGTGACTAAGCTCCATTGTCATGTGTCCGATGTAGTAAATGTGTTGACTCATACTGCTAAAGTGGAACCGGAAACTGTGGGCATTACTGCAATTAAGAAATTGACACAAAAACACCTTGAGCAAGACAAGAGGGAGCTAAATGGTGATGATCAGTATGGAGAGACCAATGTTGACACGCTTGATAATTTGTCTTCTTCCGTAATTTCTTCTGATGAGCAAAATAGTTTTCGAGGCATGGAAAATGACAGTGGATTATGTGATGCAAAGGTGGTTGATTCAGTTCATCAAGAAAATAGTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAAGGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCATATTTATTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGATCAAACCTTTTATCTCACTAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCATGGAGTTTAGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCAGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTACGTTTGACAGAGGAAATCCGCAAACTTCCAGTAAACCACAGCTTCGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTAGAAAAGTTGGAGAAAGCAAGGTCTGAGGAAACAGATGTTCCATTGTAA 2424 0.3866 MKTKLGRKSNVEMKKALRRMLEKEEETGEDPSSFFVNKSKVVGKEVKKKKRENRGRKRKIISDENNALKEKKKDNCGRKRKIIFNSEDIKEKKNGGFVKKEKKEPYRKRKKLIYGNFNKGGYALRSAGKMKFDCMHKETKNKEETNINDHDVKLSKYMLEHLLPYLRQLDLEQMAEKEIEAKIQGLKRSELKIEVADCSKDEYAYCDNCQTSIFDYHRSCTKCSFDLCLRCCYELRRGELLGGADPNEFEFINRGQDYMHGENEERRIIRENESCAAAQSRGWSKSGWHAGSNGSIPCPKAKNEGDHGFLELRRMFPPNCISELVCKANQIKETVKLEDEEETLDNGCSCLKPVKKEGDIRDNTGKAAFHKDSGENFLYCPRAIDLHNHENDLRHFQWHWRKGEPVIVSNVLESCTSGLSWEPLVMWCAFHQISDTNHSSLLDVKAIDCLNWCQGDIKVHDFFTGYTNGRKDKLDWPQLLKLNDQPPNLFEKNLPHHCAELISSLPYKEYTDPFKGSLNLTVKLPDNVYMGPKTYIAYGFDQELGWGDSVTKLHCHVSDVVNVLTHTAKVEPETVGITAIKKLTQKHLEQDKRELNGDDQYGETNVDTLDNLSSSVISSDEQNSFRGMENDSGLCDAKVVDSVHQENSLDGALWDIFRREDVPKLKEYLKKHFREFRHIYCSPLKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSLVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECLRLTEEIRKLPVNHSFAEDKLEVKKMIIHAMLDVVEKLEKARSEETDVPL* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2517 807 ProSiteProfiles JmjC domain profile. 474 765 IPR003347 -
Mal6g2517 807 SMART cupin_9 494 765 IPR003347 -
Mal6g2517 807 MobiDBLite consensus disorder prediction 1 31 - -
Mal6g2517 807 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 38 798 IPR045109 GO:0032454|GO:0033169
Mal6g2517 807 Pfam JmjC domain, hydroxylase 639 748 IPR003347 -
Mal6g2517 807 SUPERFAMILY Clavaminate synthase-like 387 792 - -
Mal6g2517 807 MobiDBLite consensus disorder prediction 1 65 - -
Mal6g2517 807 Gene3D Cupin 380 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2517 Mal-Chr6 60886108 60892189 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal6g2517 JmjC 2.6e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2517 K15601 - gmx:100780803 869.381