Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2495 ATGACGTTAAAAGAGCGCTTCGTGAATATGAAAGTTCTGAAGCTATATGCATGGGAAACATATTTTAAAAACGTTGTACATTTCTTAAGAAATGTGGAACTCAAATTGTTATCTGCAGTGCAATTAAGAAGAACATACAATATATTTCTCTTTTGGACCTCGCCGATGTTGGTGTCAGCGGCTTCTTTTTTGGCATGTTACTTCTTGAATATTCCTTTGAATGCAGGTAATGTATTCAATTTTGTGGCAACTTTGTGGCTTGTACAAGAACCATTTTCAAGCGTCCCAGAAGTTATTGCAGTGATCATTCAGGCAAAAGTTGCATTTAATCGTATTGTTAATTTCTTTGAGGCACCAGAACTGCAAAGTAATACATCAAAGCCAACACTAAGGAACATAAATTTAAACGTTATACATGGGCAAAAGGTGGCTATTTCAACAATTCTTGGGGAAATTTCTAAAACAAAAGGAACTATCGATGTTCATGGGAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGCACAATACGGGAAAATATTTTGTTTGGATCTCAGTTGGATGATCAAAGATATCAAGAAACAATTAAGAGGTCTTTACTGGTAAAGGACCTTGAGTTGTTACCCTATGGGGACCTCACTAAAATAGGTGAGAGAGGATTTAATTTAAGTGGAGGTCAAAAGCAAAGAATTCAACTTGCTCGTGCTCTTTATCAGAATGCTAATATATATTTGTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCAAAAAATTTGTTTAATAAATACATCTTGGAAGGACTCGAAGGGAAAACAGTCTTACTCGTGAATCACCAAGTCGACTTCCTACCAGCATTTGATTCTATTTTGTTGATGTCTTACGGGGCAATCCTAGAAGCTGGTCCATATCACCAGCTATCGACCTCAAGCAAAGAATTCCATGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCTAACCAACTTACAAGTGCTACTTCTTTCCAGAGACATTCAACTTCCAGAAAGAGCACGCTAGCATCGGAGTTGAAGCAAAGAGAGAGAGAGAAAGGAGACACAGGATTGAAGCCTTACTTACAATATTTGAATAAGATGAAAGGCTATATATTCTTTTCTATCGCTTCCCTTTGTCATCTTCTTTTTATGGTTGGTCAGATATTGCAAAATTCATGGATGGCTGCTAATGTTGGCAATCCCCTTGTCAGTACATTGCAATTGATTTTAGTTTATTTCCTTATTGGTGGTTTGTCAATGGTTTTCTTGTTCATCAGATGTCTACTTGTAGTTACTTTGGGTCTTCAATCATCAAAAGATTTATTTTCACAGTTGATGAACTCCCTCTTTCGTGCACCCATGTCATTTTATGACTCTACACCATTGGGAAGGGTCTCATCTGATCTAAGTATCATGGATCTTGACGTTCCATTTAGCATCGCTTTTGTTGTGGCGGGCACTATAAGTTTTTATTCTTATCTTACAGTTTTGGTGTTTGTCACATGGCAAGTCTTGATTGTGGCTATACTAATGGTTTATGTTGTAATTCGCTTGCAGAGATACTACTTTGCCTCAGCAAAAGAAGTAATGCGGTTGAATGACACAACAAAATCCTCTTTAGCTAATCATGTAGCTGAAACTGTAGCTGGAGCTGTAACGATAAGGGCTTTTGAGGATGAAGATCGTTCTTTTGAGAAGAACCTTGATCTAATTGATATGAATGCTAGTGCTTATTTTCATAGTTTTGCCTCAAACGAGTGGTTGATACAACGGTTAGAAACAATTAGTGCAATTGTTCTCGCCGCGGCAGCATGTTGCCTTCTTATGCTCCCTCCTGGAACTTTCCCCTCAGGAATTATGGGCATGGCTCTATCTTATGGCCTATCACTAAACGCTACCTTAGTATATTCAATTCAACATCAATGCACTCTTGCTAATTCTATAATATCAGTAGAGAGGGTAAATCATTATATGCATATACAAAGTGAGGCCGAAGAAATAATAGAAGGAAATCGTCCTCCTTTGAATTGGCCAGTTGCTGGCAAAGTAGAAATAAATAACTTGAAGATACGATACAAACAGGGCGGACCACTTGTACTTCATGGGATCACATGCACATTTGAAGCAGGTCACAAGATAGGTATTGTTGGCAGAACAGGCAGTGGGAAGTCCACTCTTATTGGTGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGAAAAATTGTAGTTAATGGCTCTTTTGACGAAGCAACTGCATCAATTGATAATTCTACTGATCTGATTGTCCAGAAAACAATTAGGGCTGAGTTTACAGATTGTACAGTGATCATAGTAGCACACAGGATACCAACTGTGATGGATTGCACTATGGTTGTTGCTATAAGTGATGGAAAATTGGCGGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGAATCCATGTTCAGGCAACTTGTCAAGGAATACTGGTCTCATTTTCAGTCGGCAGAATCAAATTGA 2529 0.3836 MTLKERFVNMKVLKLYAWETYFKNVVHFLRNVELKLLSAVQLRRTYNIFLFWTSPMLVSAASFLACYFLNIPLNAGNVFNFVATLWLVQEPFSSVPEVIAVIIQAKVAFNRIVNFFEAPELQSNTSKPTLRNINLNVIHGQKVAISTILGEISKTKGTIDVHGKFAYVSQTAWIQTGTIRENILFGSQLDDQRYQETIKRSLLVKDLELLPYGDLTKIGERGFNLSGGQKQRIQLARALYQNANIYLLDDPFSAVDAHTAKNLFNKYILEGLEGKTVLLVNHQVDFLPAFDSILLMSYGAILEAGPYHQLSTSSKEFHDLVNAHKETAGSNQLTSATSFQRHSTSRKSTLASELKQREREKGDTGLKPYLQYLNKMKGYIFFSIASLCHLLFMVGQILQNSWMAANVGNPLVSTLQLILVYFLIGGLSMVFLFIRCLLVVTLGLQSSKDLFSQLMNSLFRAPMSFYDSTPLGRVSSDLSIMDLDVPFSIAFVVAGTISFYSYLTVLVFVTWQVLIVAILMVYVVIRLQRYYFASAKEVMRLNDTTKSSLANHVAETVAGAVTIRAFEDEDRSFEKNLDLIDMNASAYFHSFASNEWLIQRLETISAIVLAAAACCLLMLPPGTFPSGIMGMALSYGLSLNATLVYSIQHQCTLANSIISVERVNHYMHIQSEAEEIIEGNRPPLNWPVAGKVEINNLKIRYKQGGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIVVNGSFDEATASIDNSTDLIVQKTIRAEFTDCTVIIVAHRIPTVMDCTMVVAISDGKLAEYDEPMNLMKREESMFRQLVKEYWSHFQSAESN* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2495 842 Gene3D ABC transporter type 1, transmembrane domain 344 674 IPR036640 GO:0005524|GO:0016021
Mal6g2495 842 Pfam ABC transporter transmembrane region 385 615 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g2495 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 665 831 IPR027417 -
Mal6g2495 842 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 756 841 - -
Mal6g2495 842 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 125 754 - -
Mal6g2495 842 SMART AAA_5 139 300 IPR003593 -
Mal6g2495 842 SMART AAA_5 718 805 IPR003593 -
Mal6g2495 842 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 104 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g2495 842 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524
Mal6g2495 842 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 110 323 IPR003439 GO:0005524
Mal6g2495 842 Gene3D - 124 331 IPR027417 -
Mal6g2495 842 Pfam ABC transporter 709 755 IPR003439 GO:0005524
Mal6g2495 842 Gene3D ABC transporter type 1, transmembrane domain 2 123 IPR036640 GO:0005524|GO:0016021
Mal6g2495 842 CDD ABCC_MRP_domain1 123 296 - -
Mal6g2495 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 323 IPR027417 -
Mal6g2495 842 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 380 655 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g2495 842 MobiDBLite consensus disorder prediction 332 350 - -
Mal6g2495 842 Pfam ABC transporter 146 252 IPR003439 GO:0005524
Mal6g2495 842 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 5 124 - -
Mal6g2495 842 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 756 841 - -
Mal6g2495 842 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 125 754 - -
Mal6g2495 842 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 5 124 - -
Mal6g2495 842 SUPERFAMILY ABC transporter transmembrane region 4 120 IPR036640 GO:0005524|GO:0016021
Mal6g2495 842 Gene3D - 676 755 IPR027417 -
Mal6g2495 842 MobiDBLite consensus disorder prediction 332 360 - -
Mal6g2495 842 SUPERFAMILY ABC transporter transmembrane region 371 674 IPR036640 GO:0005524|GO:0016021
Mal6g2495 842 CDD ABC_6TM_ABCC_D2 378 667 IPR044726 GO:0140359
Mal6g2495 842 Gene3D - 756 841 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2495 Mal-Chr6 59763730 59805561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2495 756 837 Calmodulin-binding Proteins AT2G36910 28.571 6.26e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2495 K05666 - gmx:100787314 1091.64